DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment PMCA and atp2b3

DIOPT Version :9

Sequence 1:NP_001014689.3 Gene:PMCA / 43787 FlyBaseID:FBgn0259214 Length:1255 Species:Drosophila melanogaster
Sequence 2:XP_012823355.1 Gene:atp2b3 / 100125191 XenbaseID:XB-GENE-977575 Length:1242 Species:Xenopus tropicalis


Alignment Length:1244 Identity:749/1244 - (60%)
Similarity:905/1244 - (72%) Gaps:70/1244 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    11 YGISLKQLRELMEHRGREGVMKIAEN-GGIHELCKKLYTSPNEGLSGSKADEEHRRETFGSNVIP 74
            :|.:|::||.|||.||.|.:.||.:: |.::.||::|.|||.||||.:.||.|.||:.:|.|.||
 Frog    25 FGCTLQELRSLMELRGSEAIQKIQDSYGDVNGLCRRLKTSPTEGLSENIADFEKRRQIYGVNFIP 89

  Fly    75 PKPPKTFLTLVWEALQDVTLIILEVAALVSLGLSFYKPADEDAPVL--------QEEEEHHGWIE 131
            ||.|||||.|||||||||||||||:||:||||||||.|..|.:...        .|.|...||||
 Frog    90 PKKPKTFLQLVWEALQDVTLIILEIAAIVSLGLSFYAPPGEQSDNCGNVSGGGHDEGEAEAGWIE 154

  Fly   132 GLAILISVIVVVIVTAFNDYSKERQFRGLQNRIEGEHKFSVIRGGEVCQISVGDILVGDIAQVKY 196
            |.|||:|||.||:||||||:|||:||||||:|||.|.:|||||.|:|.||.|.:::||||||:||
 Frog   155 GAAILLSVICVVLVTAFNDWSKEKQFRGLQSRIEQEQRFSVIRNGQVVQIPVAELIVGDIAQIKY 219

  Fly   197 GDLLPADGCLIQSNDLKVDESSLTGESDHVKKGPDVDPMVLSGTHVMEGSGKMVVTAVGVNSQAG 261
            ||||||||.|||.||||:||||||||||||:|..:.|||:|||||||||||:|||||||||||.|
 Frog   220 GDLLPADGVLIQGNDLKIDESSLTGESDHVRKSVEKDPMLLSGTHVMEGSGRMVVTAVGVNSQTG 284

  Fly   262 IIFTLLGAAVDEQEAEIKKMKKEAKRANKQKNLTGEN-------------DGRSQIKGSQAPSQR 313
            ||||||||..:|:|   ||.||.:|.|.....:|..|             ||..:...::|..|.
 Frog   285 IIFTLLGAGGEEEE---KKDKKASKSAVNAHQITAANAFLPSGYINGKQQDGAVETNQNKAKKQD 346

  Fly   314 ETVTSEITKSES-EGNHLPQSSSSGAAETGHKKEKSVLQAKLTKLAIQIGYAGSTIAVLTVIILI 377
            ..|..|:...:| ||..:.:.....|:..  ||||||||.||||||:|||.||..::.:|||||:
 Frog   347 GAVAMEMQPLKSAEGGEMEEREKKKASVP--KKEKSVLQGKLTKLAVQIGKAGLVMSAITVIILV 409

  Fly   378 IQFCIKTFVIDEKPWKN----TYANNLVKHLIIGVTVLVVAVPEGLPLAVTLSLAYSVKKMMKDN 438
            :.|.|:|||:|.|.|..    .|....||..||||||||||||||||||||:|||||||||||||
 Frog   410 LYFVIQTFVVDGKVWLTECTPVYVQYFVKFFIIGVTVLVVAVPEGLPLAVTISLAYSVKKMMKDN 474

  Fly   439 NLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSYICEKLCKVLPTLSDIPQHVGNLITMGIS 503
            ||||||||||||||||||||||||||||||||||||.|.:...|..|..|.|...:.:|:...|:
 Frog   475 NLVRHLDACETMGNATAICSDKTGTLTTNRMTVVQSNIGDIHNKDKPDPSSINHKILDLLVNAIA 539

  Fly   504 VNSAYTSNIMAGHNPGDLPIQVGNKTECALLGFVQGLGVKYQSIRDEITEDKFTRVYTFNSVRKS 568
            :|.|||:.|:.....|.||.||||||||||||||..:...||.:||:|.|:...:||||||||||
 Frog   540 INCAYTTKILPPEKEGALPQQVGNKTECALLGFVLDMQRDYQLVRDQIPEETLYKVYTFNSVRKS 604

  Fly   569 MGTVIPRPNGGYRLYTKGASEIIMKKCAFIYGHEGTLEKFTRDMQERLIREVIEPMACDGLRTIS 633
            |.|:|..||||:|||:||||||::|||:.|....|.|..|....:|.::::|||||||||||||.
 Frog   605 MSTIIRLPNGGFRLYSKGASEIVLKKCSNILNSAGDLRAFRARDREEMVKKVIEPMACDGLRTIC 669

  Fly   634 VAYRDFVPGKAAINEVHIDGEPNWDDEENIMTNLTCLCVVGIEDPVRPEVPDAIRKCQRAGITVR 698
            :||||| ||..         ||.|::|..|:.:|||:.|||||||||||||:|||||||||||||
 Frog   670 IAYRDF-PGVP---------EPEWENENEIVCDLTCIGVVGIEDPVRPEVPEAIRKCQRAGITVR 724

  Fly   699 MVTGDNINTARSIASKCGILRPNDDFLILEGKEFNRRIRDSNGDIQQHLIDKVWPKLRVLARSSP 763
            |||||||||||:||:||||::|.:|||.|||||||||||:..|:|:|..:||:||||||||||||
 Frog   725 MVTGDNINTARAIAAKCGIIQPGEDFLCLEGKEFNRRIRNEKGEIEQERLDKIWPKLRVLARSSP 789

  Fly   764 TDKYTLVKGIIDSTVSENREVVAVTGDGTNDGPALKKADVGFAMGIAGTDVAKEASDIILTDDNF 828
            |||:||||||||||:.|.|:|||||||||||||||||||||||||:|||||||||||||||||||
 Frog   790 TDKHTLVKGIIDSTIGEQRQVVAVTGDGTNDGPALKKADVGFAMGLAGTDVAKEASDIILTDDNF 854

  Fly   829 SSIVKAVMWGRNVYDSIAKFLQFQLTVNVVAVIVAFIGACAVQDSPLKAVQMLWVNLIMDTLASL 893
            |||||||||||||||||:||||||||||||||||||.|||..|||||||||||||||||||.|||
 Frog   855 SSIVKAVMWGRNVYDSISKFLQFQLTVNVVAVIVAFTGACITQDSPLKAVQMLWVNLIMDTFASL 919

  Fly   894 ALATEFPTPDLLLRKPYGRTKPLISRTMMKNILGQALYQLIIIFGLLFVGDVILDIESGRGQELN 958
            |||||.||..|||||||||.||||||||||||||.|:|||||||.|||.|::..||:|||...|:
 Frog   920 ALATEPPTESLLLRKPYGRNKPLISRTMMKNILGHAVYQLIIIFTLLFAGEIFFDIDSGRNAPLH 984

  Fly   959 AGPTQHFTIIFNTFVMMTLFNEINARKIHGQRNVIEGLLTNPIFYTIWIFTMISQVLIIQYGKMA 1023
            |.|::|:||||||||||.||||||||||||:|||.:|:.:||||.:|.:.|...|:||:|:|...
 Frog   985 APPSEHYTIIFNTFVMMQLFNEINARKIHGERNVFDGIFSNPIFCSIVLGTFGVQILIVQFGGKP 1049

  Fly  1024 FSTKALTLDQWLWCIFFGIGTLVWGQLITSVPTRKLPKILSWGRGHPEEYTDGMNLGEERFDSID 1088
            ||...|...|||||:|.|:|.|||||:|.:|||.:|..:...|.|..::......|.|:..:...
 Frog  1050 FSCAPLNAQQWLWCLFVGVGELVWGQVIAAVPTSQLKCLKEAGHGPGKDEITDEELAEDEEEIDH 1114

  Fly  1089 SDKKPRAGQILWIRGLTRLQTQLRVIRAFRSTL-EDLNERRSMHSLHS-LRSPRTGIPVAVGGGH 1151
            ::::.|.|||||.|||.|:|||:||::||||:| |.|.:..|..|:|: :.:|...|      ..
 Frog  1115 AERELRRGQILWFRGLNRIQTQIRVVKAFRSSLYEGLEKPESKTSIHNFMTTPEFLI------ND 1173

  Fly  1152 PLYNFNLLNPNYIKHQQQQEPKL-----PPQTQLN---VSSGMMSPDISYIDEDPQQQ------Q 1202
            .::|..|::...::..::...|:     ||....|   :.||:      |:..|..:.      :
 Frog  1174 YIHNIPLIDDTDVEDSEEPPGKVLWSIPPPSPNKNNNAIDSGI------YLTTDTSKSATSSNPE 1232

  Fly  1203 RTLHNGLTS 1211
            ..||:..||
 Frog  1233 SPLHSMETS 1241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PMCANP_001014689.3 ATPase-IIB_Ca 1..1057 CDD:273668 702/1072 (65%)
Cation_ATPase_N 36..104 CDD:279080 44/68 (65%)
E1-E2_ATPase 172..448 CDD:278548 174/293 (59%)
Cation_ATPase 505..598 CDD:289987 57/92 (62%)
HAD_like 676..807 CDD:119389 108/130 (83%)
Cation_ATPase_C 873..1051 CDD:279079 124/177 (70%)
ATP_Ca_trans_C 1096..1142 CDD:289209 25/47 (53%)
atp2b3XP_012823355.1 ATPase-IIB_Ca 13..1083 CDD:273668 702/1072 (65%)
Cation_ATPase_N 50..119 CDD:279080 44/68 (65%)
E1-E2_ATPase 156..484 CDD:278548 203/332 (61%)
Cation_ATPase 545..634 CDD:289987 54/88 (61%)
HAD <706..825 CDD:289480 96/118 (81%)
Cation_ATPase_C 899..1077 CDD:279079 124/177 (70%)
ATP_Ca_trans_C 1122..1169 CDD:289209 25/46 (54%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 259 1.000 Domainoid score I1949
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H123775
Inparanoid 1 1.050 1374 1.000 Inparanoid score I132
OMA 1 1.010 - - QHG53587
OrthoDB 1 1.010 - - D115892at2759
OrthoFinder 1 1.000 - - FOG0000362
OrthoInspector 1 1.000 - - otm47598
Panther 1 1.100 - - LDO PTHR24093
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X220
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1111.080

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