DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and Bag6

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_006256144.1 Gene:Bag6 / 94342 RGDID:71064 Length:1219 Species:Rattus norvegicus


Alignment Length:460 Identity:106/460 - (23%)
Similarity:151/460 - (32%) Gaps:116/460 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKK 67
            :.:|.|..||.|.....:..|.|.|:.|  .......:|||:|||.|.:|.||:.:..|||..|.
  Rat    56 VLVKTLDSQTRTFIVGAQMNVKEFKEHI--AASVSIPSEKQRLIYQGRVLQDDKKLQDYNVGGKV 118

  Fly    68 FIVV-------MLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANH------TNSPSSTNT 119
            ..:|       .|...:||...:..:......|..|.....|.....||.      .|.||..:.
  Rat   119 IHLVERAPPQTQLPSGASSGTGSASATHGGGPLPGTRGPGASGHDRNANSYVMVGTFNLPSDGSA 183

  Fly   120 EDSVLSRETRPLSSDELIGELAQASLQSRAESNLLMGDEY---NQTVLSMVE--------MGYPR 173
            .|..::.|              ||.:||.....|:|....   .||:||.:|        ...|.
  Rat   184 VDVHINME--------------QAPIQSEPRVRLVMAQHMIRDIQTLLSRMECRGGTQAQASQPP 234

  Fly   174 EQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNE---STNPSLIPSGPQPAS-ATSAERST 234
            .|.....:.:.....:..|.:.:..|..|......:.|   :..|.|.||||.||. |.:.|.:.
  Rat   235 PQTPTVASETVALNSQTSEPVESEAPPREPMESEEMEERPPTQTPELPPSGPAPAGPAPAPETNA 299

  Fly   235 ESNSDPFEFL-----------RSQPQFLQMRSLI--------YQNPH--------LLHAV---LQ 269
            .::..|.|.:           |.|| |||....:        |.|.|        |::.|   |:
  Rat   300 PNHPSPAEHVEVLQELQRLQRRLQP-FLQRYCEVLGAAATTDYNNNHEGREEDQRLINLVGESLR 363

  Fly   270 QIGQTNPALLQLISENQDAFLNMLNQP-----------------------IDRESESGATVPPVS 311
            .:|.|..||       .|...|:...|                       |..:...|.||....
  Rat   364 LLGNTFVAL-------SDLRCNLACAPPRHLHVVRPMSHYTTPMVLQQAAIPIQINVGTTVTMTG 421

  Fly   312 NARIPSTLDNVDLFSPDLEVATSAQRSAA----GTSAAHQSGSAADNEDLEQPLGVSTIRLNRQD 372
            |...|......:..||....|:|...|:|    .|..|...|.|       .|...|..|:.|..
  Rat   422 NGARPPPAPGAEAASPGSGQASSLPPSSATVDSSTEGAPPPGPA-------PPPATSHPRVIRIS 479

  Fly   373 KDAIE 377
            ..::|
  Rat   480 HQSVE 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 106/460 (23%)
Bag6XP_006256144.1 Ubl_BAG6 54..124 CDD:340507 24/69 (35%)
BAG6 309..423 CDD:463449 23/121 (19%)
PRK07764 <992..1183 CDD:236090
Blue background indicates that the domain is not in the aligned region.

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