DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rad23 and ZFAND4

DIOPT Version :9

Sequence 1:NP_001259052.1 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_016872420.1 Gene:ZFAND4 / 93550 HGNCID:23504 Length:741 Species:Homo sapiens


Alignment Length:442 Identity:90/442 - (20%)
Similarity:149/442 - (33%) Gaps:128/442 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDD--RTVGSY-- 61
            |.:.|:.|....|.:..:|.:||:.:|.||.....|                |||  |.:..|  
Human    84 MELFIETLTGTCFELRVSPFETVISVKAKIRRLEVP----------------TDDPLRKMAEYLD 132

  Fly    62 ----NVDEK----KFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMP-------------- 104
                .|.||    |.:..::.::....|......:....||...||.:.:.              
Human   133 SSRVEVWEKTSCSKQVTFLVYQEGDQLNFFPAVDRGDGTLTPLSDSSKKIDFHLHVLRRKGEHRM 197

  Fly   105 -----CEEANHTNSPSSTNTEDSVLSRETRPLSSDELIGE----LAQASLQSRAESNLLMGDEYN 160
                 |...:..||.:.   ||    .||.|.||.:.|.|    :.:..|......|:.:..:..
Human   198 SYCFLCSGGSMYNSDTD---ED----EETEPSSSGQQIIENSITMNKMKLLKAKMKNMNLSKKPK 255

  Fly   161 QTVLSMVEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQP- 224
            :.|...     |...|....::....|.|  ..|:..:|        .:.:|.:|:...:.|.. 
Human   256 KAVKIK-----PHPPVAPRPSSGSTAPSR--HRLLRVLP--------NIGQSCSPAFGNAYPPEI 305

  Fly   225 --------ASATSAERSTESNSDPFEFLRSQ--------PQFLQMRSLIYQNPHLLHAVLQQIGQ 273
                    |:..||||...|.:.  |||:..        ..|.....|..|.|||      ::|.
Human   306 SRNGISSLATQLSAERYISSITG--EFLKEDNSWENNTLSHFSSNVKLPPQIPHL------ELGN 362

  Fly   274 TNPALLQLISENQDAFLNMLNQPIDRESESGATVPPVSN---ARIPSTLDNVDLFSPDLEVATSA 335
            .        .|..|:.|::           |:::|..:.   ..:||:..|:.|.|.:. |...:
Human   363 D--------QELADSVLHL-----------GSSLPRQTKHFLGNLPSSNGNIVLPSEEC-VTEQS 407

  Fly   336 QRSAAGTSAAHQSGSAAD-NEDLEQPLGVSTIRLNRQDKDAIERLKALGFPE 386
            .....|:.|:...|:|.: :..||   |...:.|.....:|.:.|||   ||
Human   408 LLPKVGSLASFAEGNADEQSSGLE---GACKVNLELLLTNADKGLKA---PE 453

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_001259052.1 rad23 1..413 CDD:273167 90/442 (20%)
RAD23_N 1..76 CDD:176400 20/86 (23%)
UBA1_Rhp23p_like 153..199 CDD:270561 6/45 (13%)
XPC-binding 242..296 CDD:286376 13/61 (21%)
UBA2_HR23A 371..411 CDD:270610 6/16 (38%)
ZFAND4XP_016872420.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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