DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rad23 and OASL

DIOPT Version :9

Sequence 1:NP_001259052.1 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_003724.1 Gene:OASL / 8638 HGNCID:8090 Length:514 Species:Homo sapiens


Alignment Length:70 Identity:16/70 - (22%)
Similarity:38/70 - (54%) Gaps:4/70 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERG-PEYVAEKQKLIYAGVILTDDRTVGSYNVDEK 66
            :.:||....::.....|...:|.||::|.:::| |:   ::|:|.:.|.:|.|...:|.|.:.:.
Human   436 VFVKNPDGGSYAYAINPNSFILGLKQQIEDQQGLPK---KQQQLEFQGQVLQDWLGLGIYGIQDS 497

  Fly    67 KFIVV 71
            ..:::
Human   498 DTLIL 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_001259052.1 rad23 1..413 CDD:273167 16/70 (23%)
RAD23_N 1..76 CDD:176400 16/70 (23%)
UBA1_Rhp23p_like 153..199 CDD:270561
XPC-binding 242..296 CDD:286376
UBA2_HR23A 371..411 CDD:270610
OASLNP_003724.1 NT_2-5OAS_ClassI-CCAase 29..212 CDD:143390
OAS1_C 168..351 CDD:313619
OASL_repeat1 354..433 CDD:176406
ubiquitin 436..506 CDD:306702 16/70 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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