Protein Alignment Rad23 and RUB1

DIOPT Version :10

• Sequence 1: NP_651918.2
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_564379.2
• Gene: RUB1 / 840023
• AraportID: AT1G31340
• Length: 156
• Species: Arabidopsis thaliana
• Alignment Length: 115
• Identity: 32/115 - (27%)
• Similarity: 56/115 - (48%)
• Gaps: 13/115 - (11%)

  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.|.:|.|..:|.|:|.....|:..:|.||.::.|  ...::|:||:||..|.|.||:..||:.:
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLADYNIQK 63

  Fly    66 KKFI-VVMLTRDSSSSNRNQLSVKESN-KLTSTD---------DSKQSMP 104
            :..: :|:..|..:......|:.||.. .:..||         :.|:.:|
plant    64 ESTLHLVLRLRGGTMIKVKTLTGKEIEIDIEPTDTIDRIKERVEEKEGIP 113

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_651918.2	rad23	1..413	CDD:273167	32/115 (28%)
RUB1	NP_564379.2	Ubl_ubiquitin	1..76	CDD:340501	25/76 (33%)
		Ubl_NEDD8	79..152	CDD:340504	7/35 (20%)