Protein Alignment Rad23 and UBQ4

DIOPT Version :10

• Sequence 1: NP_651918.2
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_568397.1
• Gene: UBQ4 / 832184
• AraportID: AT5G20620
• Length: 382
• Species: Arabidopsis thaliana
• Alignment Length: 423
• Identity: 85/423 - (20%)
• Similarity: 136/423 - (32%)
• Gaps: 133/423 - (31%)

  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.|.:|.|..:|.|:|.....|:..:|.||.::.|  ...::|:||:||..|.|.||:..||:.:
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLADYNIQK 63

  Fly    66 KKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETRP 130
            :..:.::|......    |:.||.....|.|.:.:           :|.:..|.:..:..:|..|
plant    64 ESTLHLVLRLRGGM----QIFVKTLTGKTITLEVE-----------SSDTIDNVKAKIQDKEGIP 113

  Fly   131 LSSDELI--GE-------LAQASLQSRAESNLLM----GDEY------NQTVLSMVEMGYPREQV 176
            .....||  |:       ||..::|..:..:|::    |.:.      .:|:...||.....:.|
plant   114 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

  Fly   177 ERAMAASYNNPERAVEYLINGIPAEEG---TFYNRLNESTNPSLIPSGPQPASATSAERSTESNS 238
            :..:......|......:..|...|:|   ..||...|||
plant   179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKEST------------------------- 218

  Fly   239 DPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNML-NQPIDRESE 302
                                     ||.||:..|            ....|:..| .:.|..|.|
plant   219 -------------------------LHLVLRLRG------------GMQIFVKTLTGKTITLEVE 246

  Fly   303 SGATVPPVSNARIPSTLDNVDLFSPDLE-VATSAQRSAAGTSAAHQSGSAAD-NEDLEQPLGV-- 363
            |.            .|:|||.....|.| :....||............:.|| |...|..|.:
plant   247 SS------------DTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVL 299

  Fly   364 ---------------STIRLNRQDKDAIERLKA 381
                           .||.|..:..|.|:.:||
plant   300 RLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 332

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_651918.2	rad23	1..413	CDD:273167	85/423 (20%)
UBQ4	NP_568397.1	Ubl_ubiquitin	1..76	CDD:340501	24/76 (32%)
		Ubl_ubiquitin	77..152	CDD:340501	16/89 (18%)
		Ubl_ubiquitin	153..228	CDD:340501	18/136 (13%)
		Ubl_ubiquitin	229..304	CDD:340501	19/86 (22%)
		Ubl_ubiquitin	305..380	CDD:340501	7/28 (25%)