DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rad23 and AT4G02950

DIOPT Version :9

Sequence 1:	NP_001259052.1	Gene:	Rad23 / 43785	FlyBaseID:	FBgn0026777	Length:	414	Species:	Drosophila melanogaster
Sequence 2:	NP_192204.1	Gene:	AT4G02950 / 828123	AraportID:	AT4G02950	Length:	318	Species:	Arabidopsis thaliana

Alignment Length:	220	Identity:	55/220 - (25%)
Similarity:	86/220 - (39%)	Gaps:	60/220 - (27%)

- Green bases have known domain annotations that are detailed below.

  Fly     3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKK 67
            :.|:|....:|||:.:...|||.:|:||...:|..  ..||.||:...:|.|...:....:....
plant    38 VIIENQSGSSFTIDVSFWDTVLMIKRKIEMTQGTP--VSKQILIFKRKVLQDHLNMFGCQIRHNS 100

  Fly    68 FIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEE-ANHTNSPSSTNTEDSVLSRE---- 127
            .|::.::.|   .|..|..|.::|:..||    .|.|..| .|:.:||.|  .:.|.|:.|
plant   101 RILLSISPD---DNPTQNQVPQTNQSPST----PSNPIHEFVNNQDSPLS--PQSSALTMEKFSK 156

  Fly   128 --------------------TRP-LSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGY 171
                                :|| .|.|||        |..|..|.:.:|...|
plant   157 NQQDRPPLMRVVAKRIDNGSSRPSYSLDEL--------LAPRDSSTVAVGSIRN----------- 202

  Fly   172 PREQVERAMAASYNNPERAVEYLIN 196
             |:|..:...:|   |..:||.:||
plant   203 -RDQEVKNRESS---PSDSVEEVIN 223

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_001259052.1	rad23	1..413	CDD:273167	55/220 (25%)
		RAD23_N	1..76	CDD:176400	19/72 (26%)
		UBA1_Rhp23p_like	153..199	CDD:270561	10/44 (23%)
		XPC-binding	242..296	CDD:286376
		UBA2_HR23A	371..411	CDD:270610
AT4G02950	NP_192204.1	UBQ	36..104	CDD:214563	19/67 (28%)
AT4G02950	NP_192204.1	ubiquitin	42..109	CDD:278661	18/68 (26%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900