Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_192245.2 | Gene: | AT4G03360 / 827958 | AraportID: | AT4G03360 | Length: | 322 | Species: | Arabidopsis thaliana |
Alignment Length: | 301 | Identity: | 72/301 - (23%) |
---|---|---|---|
Similarity: | 114/301 - (37%) | Gaps: | 80/301 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKK 67
Fly 68 FIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEE-ANHTNSPSSTNTEDSVLSRE---- 127
Fly 128 --------------------TRP-LSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGY 171
Fly 172 PREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPASATSAERSTES 236
Fly 237 NSDPFEFLRSQPQFLQMR---SLIYQNPHLLH----AVLQQ 270 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 72/301 (24%) |
RAD23_N | 1..76 | CDD:176400 | 19/72 (26%) | ||
UBA1_Rhp23p_like | 153..199 | CDD:270561 | 10/45 (22%) | ||
XPC-binding | 242..296 | CDD:286376 | 11/36 (31%) | ||
UBA2_HR23A | 371..411 | CDD:270610 | |||
AT4G03360 | NP_192245.2 | None | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | O | PTHR10621 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |