Protein Alignment Rad23 and UBQ10

DIOPT Version :10

• Sequence 1: NP_651918.2
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_849299.4
• Gene: UBQ10 / 825880
• AraportID: AT4G05320
• Length: 457
• Species: Arabidopsis thaliana
• Alignment Length: 449
• Identity: 94/449 - (20%)
• Similarity: 158/449 - (35%)
• Gaps: 109/449 - (24%)

  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.|.:|.|..:|.|:|.....|:..:|.||.::.|  ...::|:||:||..|.|.||:..||:.:
plant     1 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLADYNIQK 63

  Fly    66 KKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETRP 130
            :..:.::|......    |:.||.....|.|.:.:           :|.:..|.:..:..:|..|
plant    64 ESTLHLVLRLRGGM----QIFVKTLTGKTITLEVE-----------SSDTIDNVKAKIQDKEGIP 113

  Fly   131 LSSDELI--GE-------LAQASLQSRAESNLLM----GDEY------NQTVLSMVEMGYPREQV 176
            .....||  |:       ||..::|..:..:|::    |.:.      .:|:...||.....:.|
plant   114 PDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNV 178

  Fly   177 ERAMAASYNNPERAVEYLINGIPAEEG---TFYNRLNESTNPSL--IPSGPQPASATSAERSTE- 235
            :..:......|......:..|...|:|   ..||...|||...:  :..|.|....|...::..
plant   179 KAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITL 243

  Fly   236 --SNSDPFEFLRSQPQFLQ-----MRSLIY----------------QNPHLLHAVLQQIGQTNPA 277
              .:||..:.::::.|..:     .:.||:                |....||.||:..|
plant   244 EVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRG----- 303

  Fly   278 LLQLISENQDAFLNML-NQPIDRESESGATVPPVSNARIPSTLDNVDLFSPDLE-VATSAQRSAA 340
                   ....|:..| .:.|..|.||.            .|:|||.....|.| :....||...
plant   304 -------GMQIFVKTLTGKTITLEVESS------------DTIDNVKAKIQDKEGIPPDQQRLIF 349

  Fly   341 GTSAAHQSGSAAD-NEDLEQPLGV-----------------STIRLNRQDKDAIERLKA 381
            .........:.|| |...|..|.:                 .||.|..:..|.|:.:||
plant   350 AGKQLEDGRTLADYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVESSDTIDNVKA 408

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_651918.2	rad23	1..413	CDD:273167	94/449 (21%)
UBQ10	NP_849299.4	Ubl_ubiquitin	1..76	CDD:340501	24/76 (32%)
		Ubl_ubiquitin	77..152	CDD:340501	16/89 (18%)
		Ubl_ubiquitin	153..228	CDD:340501	13/74 (18%)
		Ubl_ubiquitin	229..304	CDD:340501	13/86 (15%)
		Ubl_ubiquitin	305..380	CDD:340501	19/86 (22%)
		Ubl_ubiquitin	381..456	CDD:340501	7/28 (25%)