Protein Alignment Rad23 and AT4G05240

DIOPT Version :9

• Sequence 1: NP_001259052.1
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_192433.1
• Gene: AT4G05240 / 825872
• AraportID: AT4G05240
• Length: 197
• Species: Arabidopsis thaliana
• Alignment Length: 116
• Identity: 30/116 - (25%)
• Similarity: 49/116 - (42%)
• Gaps: 19/116 - (16%)

  Fly     8 LQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVM 72
            |....|.||.....||||:|:||  |:....:..:|.|.:.|.:|.|       ::|.::.:::
plant    65 LPNYKFEIELGYWDTVLEIKQKI--EKYQRILVYRQTLFFQGNVLQD-------HLDIEQCVIL- 119

  Fly    73 LTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSS-TNTEDS 122
                    |.:.|.|..........|:.|.:..||:...||... .|.:||
plant   120 --------NHSLLKVFVDPYRNPNHDNDQMLQTEESPPLNSAKEIVNVQDS 162

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_001259052.1	rad23	1..413	CDD:273167	30/116 (26%)
		RAD23_N	1..76	CDD:176400	18/67 (27%)
		UBA1_Rhp23p_like	153..199	CDD:270561
		XPC-binding	242..296	CDD:286376
		UBA2_HR23A	371..411	CDD:270610
AT4G05240	NP_192433.1	Ubiquitin_like_fold	65..130	CDD:391949	21/82 (26%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900