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Protein Alignment Rad23 and AT4G05230
DIOPT Version :9
Sequence 1: | NP_001259052.1 |
Gene: | Rad23 / 43785 |
FlyBaseID: | FBgn0026777 |
Length: | 414 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_192432.1 |
Gene: | AT4G05230 / 825871 |
AraportID: | AT4G05230 |
Length: | 206 |
Species: | Arabidopsis thaliana |
Alignment Length: | 182 |
Identity: | 44/182 - (24%) |
Similarity: | 80/182 - (43%) |
Gaps: | 46/182 - (25%) |
- Green bases have known domain annotations that are detailed below.
Fly 12 TFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIV-----V 71
||.||.....||||:|:|| |:.......||.|::.|.:|.| ::|.::.:: :
plant 12 TFEIELGYWDTVLEIKQKI--EKYQRIPVSKQTLLFQGNVLQD-------HLDIEQCVILNHSRI 67
Fly 72 MLTRDSSSSNRNQLSVKESNKLTSTDDSKQS----------MPCEEANHTNSPSSTNTEDSVLSR 126
.|:..|...:||.:.|.::.:...::.::|: :|....|:.|:|..... .||.:
plant 68 QLSISSPDQSRNNIQVFKTEQFPQSNSTEQTSNGHHESTVMIPMSNNNNNNNPKKLRV--MVLPK 130
Fly 127 E-TRPLSSD----ELIGELAQ--ASLQSRAESNLLMGDEYNQTVLSMVEMGY 171
. ||.:..| :.:|||.: |.:|.|.: ||:.:.||
plant 131 SGTRKIPVDVNAGDNVGELRKELAKIQQRFQ-------------LSLPQEGY 169
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5272 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
1 |
1.100 |
- |
- |
O |
PTHR10621 |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
3 | 2.910 |
|
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