Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_186903.1 | Gene: | RAD23C / 821195 | AraportID: | AT3G02540 | Length: | 419 | Species: | Arabidopsis thaliana |
Alignment Length: | 471 | Identity: | 136/471 - (28%) |
---|---|---|---|
Similarity: | 206/471 - (43%) | Gaps: | 123/471 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVD 64
Fly 65 EKKFIVVMLTRD------SSSSNRNQLSVKESNKLTSTDDSKQSMPCEEA-------NHTNSPSS 116
Fly 117 TNTEDSVLSRET----------------RPLSSDELIGELAQASLQSRAESNLLMGDEYNQTVLS 165
Fly 166 MVEMG---YPREQVERAMAASYNNPERAVEYLINGI------------PAEEGTFYNRLNESTNP 215
Fly 216 SLIP-SGP-----------------QPASATSAERSTESNSDPFEFLRSQPQFLQMRSLIYQNPH 262
Fly 263 LLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATVPPVSNARIPSTLDNVDLFSP 327
Fly 328 DLEVATSAQRSAAGTSAAHQSGSAADNEDLEQPLGVSTIRLNRQDKDAIERLKALGFPEALVLQA 392
Fly 393 YFACEKNEEQAANFLL 408 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 136/471 (29%) |
RAD23_N | 1..76 | CDD:176400 | 30/75 (40%) | ||
UBA1_Rhp23p_like | 153..199 | CDD:270561 | 22/60 (37%) | ||
XPC-binding | 242..296 | CDD:286376 | 21/53 (40%) | ||
UBA2_HR23A | 371..411 | CDD:270610 | 24/38 (63%) | ||
RAD23C | NP_186903.1 | rad23 | 1..416 | CDD:273167 | 136/471 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Domainoid | 1 | 1.000 | 66 | 1.000 | Domainoid score | I3557 |
eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H37704 | |
Inparanoid | 1 | 1.050 | 181 | 1.000 | Inparanoid score | I1449 |
OMA | 1 | 1.010 | - | - | QHG53856 | |
OrthoDB | 1 | 1.010 | - | - | D1260050at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0001474 | |
OrthoInspector | 1 | 1.000 | - | - | otm2754 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101279 | |
Panther | 1 | 1.100 | - | - | O | PTHR10621 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1039 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
15 | 14.840 |