Protein Alignment Rad23 and UBQ8

DIOPT Version :10

• Sequence 1: NP_651918.2
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_566357.1
• Gene: UBQ8 / 820137
• AraportID: AT3G09790
• Length: 631
• Species: Arabidopsis thaliana
• Alignment Length: 249
• Identity: 58/249 - (23%)
• Similarity: 96/249 - (38%)
• Gaps: 55/249 - (22%)

  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.|.::.|..:|.|:|.....|:..:|.||.::.|  .:..:|:||:||..|.|.||:..||:.:
plant    79 MQIFVQTLTGKTITLEVKSSDTIDNVKAKIQDKEG--ILPRQQRLIFAGKQLEDGRTLADYNIQK 141

  Fly    66 KKFIVVMLTR-------DSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSV 123
            :..:.::|..       .|:.|.:|..|...:.|:.|:|                 :..|.:..:
plant   142 ESTLHLVLRLCGGMQIFVSTFSGKNFTSDTLTLKVESSD-----------------TIENVKAKI 189

  Fly   124 LSRE-TRP------LSSDELIGE----LAQASLQSRAESNL---LMGDEY------------NQT 162
            ..|| .||      ...:||..|    ||...:::|:...|   |.||.|            .:.
plant   190 QDREGLRPDHQRLIFHGEELFTEDNRTLADYGIRNRSTLCLALRLRGDMYIFVKNLPYNSFTGEN 254

  Fly   163 VLSMVEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEG---TFYNRLNEST 213
            .:..||.....:.|:..:......|......:..|.|.|.|   ..||....||
plant   255 FILEVESSDTIDNVKAKLQDKERIPMDLHRLIFAGKPLEGGRTLAHYNIQKGST 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_651918.2	rad23	1..413	CDD:273167	58/249 (23%)
UBQ8	NP_566357.1	Ubl_ubiquitin	3..78	CDD:340501
		Ubl_ubiquitin	79..154	CDD:340501	23/76 (30%)
		Ubl1_cv_Nsp3_N-like	155..237	CDD:475130	20/98 (20%)
		Ubl1_cv_Nsp3_N-like	238..318	CDD:475130	13/71 (18%)
		Ubl1_cv_Nsp3_N-like	319..391	CDD:475130
		Ubl1_cv_Nsp3_N-like	393..468	CDD:475130
		Ubl1_cv_Nsp3_N-like	469..551	CDD:475130
		Ubl1_cv_Nsp3_N-like	552..625	CDD:475130