DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and PI4K GAMMA 4

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_566076.1 Gene:PI4K GAMMA 4 / 819260 AraportID:AT2G46500 Length:566 Species:Arabidopsis thaliana


Alignment Length:463 Identity:91/463 - (19%)
Similarity:164/463 - (35%) Gaps:116/463 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSSSSNRNQLSVKES 90
            :||:|.::||.....::|:::|.|..|.|...:.....::...:.:::.|   |:......|:::
plant   136 VKKQISKKRGDFVDPDEQEILYEGEKLEDQSLINDICRNDDSVLHLLVRR---SAKVRVKPVEKN 197

  Fly    91 NKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETR-PLSSDELI---------GELAQASL 145
            .:|:......:.....||.....|...:.|..|::.:.: ||...::|         |.....|.
plant   198 FELSIVAPQAKDKKGREAKSIVPPKKLSLEPVVVNSKAKVPLVVKDMIQSASDGLKSGNSPVRSS 262

  Fly   146 QSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLN 210
            :....:..:.|...|:.|      |..:...|..||.  |||: .:....||...::||   ::.
plant   263 EGTGGAYFMQGPSGNKFV------GVFKPIDEEPMAE--NNPQ-GLPLSPNGEGLKKGT---KVG 315

  Fly   211 ESTNPSLIPSGPQPASATSAERSTESNSDPF--EF-LRSQPQFLQMRSLIYQNPHLLH--AVLQQ 270
            |        ...:..:|...:.....|...|  |. ....|....:..|   :|...|  .:..:
plant   316 E--------GALREVAAYILDHPKSGNKSMFGEEIGFAGVPPTAMIECL---HPGFNHPKGIKTK 369

  Fly   271 IGQTNPALLQLISENQDAFLNM--LNQPIDR------------------------ESESGATV-P 308
            ||.     ||:.:||..:..:|  |:.|::.                        :.|||..| .
plant   370 IGS-----LQMFTENDGSCEDMGPLSFPVEEVHKISVLDIRLANADRHGGNILMTKDESGKLVLV 429

  Fly   309 PVSNAR-IPSTLDNVD---LFSPDLEVATSAQRSAAGTSAAHQSGSAADNEDL------------ 357
            |:.:.. :|.:.::..   |:.|......||:     |....:|..|.::.||            
plant   430 PIDHGYCLPESFEDCTFEWLYWPQARKPYSAE-----TQEYIRSLDAEEDIDLLKFHGWKMPAET 489

  Fly   358 EQPLGVSTIRLNRQDKDAIER---------------LKALGFPEALVLQAYFACEKNEEQAANFL 407
            .|.|.:||:.|    |..:||               |......|.:|.:|..|......:|| ||
plant   490 AQTLRISTMLL----KKGVERGLTAFEIGTIMCRETLSKKSLVEEMVEEAQEAVLPGTSEAA-FL 549

  Fly   408 --LSSSFD 413
              ||...|
plant   550 EALSDVMD 557

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 90/461 (20%)
PI4K GAMMA 4NP_566076.1 Ubl1_cv_Nsp3_N-like 39..107 CDD:475130
Ubl_ubiquitin_like 115..182 CDD:340559 10/45 (22%)
PI3_PI4_kinase 264..513 CDD:395364 55/285 (19%)
Blue background indicates that the domain is not in the aligned region.

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