DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and AT2G17190

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_565407.1 Gene:AT2G17190 / 816224 AraportID:AT2G17190 Length:538 Species:Arabidopsis thaliana


Alignment Length:413 Identity:84/413 - (20%)
Similarity:136/413 - (32%) Gaps:166/413 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 FTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDS 77
            |::..:.:.||...|:.|  .:..:..|.:|:|||.|.||.||:|:.||.:.....:        
plant    30 FSVTTSLDSTVESFKELI--AQNSDVPANQQRLIYKGRILKDDQTLLSYGLQADHTV-------- 84

  Fly    78 SSSNRNQLSVKESNKLTSTDDSKQSMPCEEA-NHTNSPSSTNTEDSVLSRETRPLSSDELIGELA 141
                         :.:.....|..|.|...| |.|.:|.:..:.||                   
plant    85 -------------HMVRGFVPSSPSAPAANAGNQTTAPQAVGSNDS------------------- 117

  Fly   142 QASLQSRAESNLLMGDE------YN-----QTVLSMVEMGYP-REQVERAMAASYNNPERAVEYL 194
                     |||..|:.      :|     ..:..:...|.| .||.::.:|   .||       
plant   118 ---------SNLGGGESLFPGLGFNPLGGGNAMAGLFGSGLPDLEQAQQQLA---QNP------- 163

  Fly   195 INGIPAEEGTFYNRLNESTNPSLIPSGPQPASATSAERSTESNSDPFEFLRS----QPQFLQMRS 255
                        |.:.|..|             |.|.::..:|.   ||:||    .|   |||.
plant   164 ------------NMIREMMN-------------TPAIQNLMNNP---EFMRSMIMNNP---QMRE 197

  Fly   256 LIYQNPHLLH-----AVLQQI--GQTNPALLQLISENQDAFL----------NMLNQPIDRESES 303
            |:.:||.|.|     ::|:|.  ...||.|::.:..|.|..:          |||.:..:...| 
plant   198 LVDRNPELGHVLNDPSILRQTLEAARNPELMREMMRNTDRAMSNIESMPEGFNMLRRMYENVQE- 261

  Fly   304 GATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAAHQSGSAADNEDLEQPLGVSTIRL 368
                 |:.|                   ||:...:|...::::...:...|:      ||:|   
plant   262 -----PLMN-------------------ATTMSENAGNNTSSNPFAALLGNQ------GVTT--- 293

  Fly   369 NRQDKDAIERLKA----LGFPEA 387
              |..|....:.|    .|.|.|
plant   294 --QGSDTSNNISAPNAETGTPNA 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 84/413 (20%)
AT2G17190NP_565407.1 Ubl_Dsk2p_like 18..90 CDD:340523 18/82 (22%)
STI1 367..402 CDD:128966
UBA_PLICs 495..534 CDD:270582
Blue background indicates that the domain is not in the aligned region.

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