Protein Alignment Rad23 and rad23b

DIOPT Version :9

• Sequence 1: NP_001259052.1
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_001025578.1
• Gene: rad23b / 594966
• XenbaseID: XB-GENE-984319
• Length: 416
• Species: Xenopus tropicalis
• Alignment Length: 454
• Identity: 179/454 - (39%)
• Similarity: 240/454 - (52%)
• Gaps: 79/454 - (17%)

  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVD 64
            |.||:|.||||||.|:...|:||..||:||..|:|.: :....|||||||.||.||..:..|.:|
 Frog     1 MQITLKTLQQQTFKIDIDGEETVKALKEKIELEKGKDAFPVAGQKLIYAGKILNDDTALKEYKID 65

  Fly    65 EKKFIVVMLTRDS----SSSNRNQLS--------VKESNKLTSTDDSKQ---------------- 101
            ||.|:|||:|:..    ||:.....|        ...|..||.|..::|
 Frog    66 EKNFVVVMVTKPKGAACSSTPTPAASQPASAAAPAPASPPLTYTPIARQNAPIPLPVPFSIPAVP 130

  Fly   102 --SMPCEEANHTNSPSSTNTEDSVLS-RETRPLSSDE--LIGELAQASLQSRAESNLLMGDEYNQ 161
              :.|..|.:.|.:|.....|:...| :||...||.|  |..:.::.||...|.|.|:.|..|..
 Frog   131 APAAPTSEPSTTTAPKEEKPEEKTDSPQETVSPSSTECSLPTDSSRPSLFEDATSALVTGQSYEN 195

  Fly   162 TVLSMVEMGYPREQVERAMAASYNNPERAVEYLINGIPAE-EGTFYNRLNESTNPSLIPSGPQPA 225
            .|..::.|||.||||..|:.||:|||:||||||:.|||:: ||.......::.  |..|:.|.||
 Frog   196 MVTEIMSMGYEREQVIAALRASFNNPDRAVEYLLMGIPSDREGQAVAEPPQTL--SSTPTQPLPA 258

  Fly   226 SATSAERST-----ESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISEN 285
            :|.:|..:|     .:..:|.:||::||||.|||.:|.|||.||.|:|||||:.||:|||.||::
 Frog   259 AAGAAATTTTPSTPSTGGNPLDFLQNQPQFQQMRQIIQQNPSLLPALLQQIGRENPSLLQQISQH 323

  Fly   286 QDAFLNMLNQPIDRESESGATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAAHQSGS 350
            |:.|:.|||.|:   .|||.                        :..........|...|.::||
 Frog   324 QEQFIQMLNDPV---PESGG------------------------QGGGGGGGGGGGRGIAAEAGS 361

  Fly   351 AADNEDLEQPLGVSTIRLNRQDKDAIERLKALGFPEALVLQAYFACEKNEEQAANFLLSSSFDD 414
            ...|          .|::..|:|:||||||||||||.||:||||||||||..||||||..:|||
 Frog   362 GHMN----------YIQVTPQEKEAIERLKALGFPEGLVIQAYFACEKNENLAANFLLQQNFDD 415

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_001259052.1	rad23	1..413	CDD:273167	176/451 (39%)
		RAD23_N	1..76	CDD:176400	40/75 (53%)
		UBA1_Rhp23p_like	153..199	CDD:270561	24/45 (53%)
		XPC-binding	242..296	CDD:286376	33/53 (62%)
		UBA2_HR23A	371..411	CDD:270610	32/39 (82%)
rad23b	NP_001025578.1	rad23	1..414	CDD:273167	176/451 (39%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	1	1.000	74	1.000	Domainoid score	I9005
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	1	1.000	-	-		H37704
Inparanoid	1	1.050	249	1.000	Inparanoid score	I3166
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D1260050at2759
OrthoFinder	1	1.000	-	-		FOG0001474
OrthoInspector	1	1.000	-	-		oto105217
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	1	1.030	-	avgDist	Average_Evolutionary_Distance	R1097
SonicParanoid	1	1.000	-	-		X1039
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	8	8.090