DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and faub

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001017866.2 Gene:faub / 550564 ZFINID:ZDB-GENE-050417-416 Length:133 Species:Danio rerio


Alignment Length:103 Identity:21/103 - (20%)
Similarity:39/103 - (37%) Gaps:15/103 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 EDSVLSRETRPLSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQV-----ERA 179
            :|.::|....||..|.||.:.......:...|:.|:|.:.:.   |:...|..|.|.     :..
Zfish    37 DDQIISLSGIPLEDDALICQSGIEEFNTLEVSSRLLGGKVHG---SLARAGKVRGQTPKVDKQEK 98

  Fly   180 MAASYNNPERAVEY---LINGIPAEEGTFYNRLNESTN 214
            ........:|.::|   .:|.:|    ||..:...:.|
Zfish    99 RKKRTGRAKRRIQYNRRFVNVVP----TFGKKKGPNAN 132

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 21/103 (20%)
faubNP_001017866.2 Ubl_FUBI 1..74 CDD:340491 9/36 (25%)
Ribosomal_S30 75..132 CDD:398432 10/63 (16%)

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