DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and ubl7a

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001017765.2 Gene:ubl7a / 550462 ZFINID:ZDB-GENE-050417-285 Length:379 Species:Danio rerio


Alignment Length:389 Identity:74/389 - (19%)
Similarity:151/389 - (38%) Gaps:98/389 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    28 KKIFEERGPEYVAEKQ--KLIYAGVILTDDRTVGSYNVDEKKFIVVMLTRDSSSSNRNQLSVKES 90
            |::...:.|:.:.:.:  :|:|.|..|.||.|:.||.:.....:.::    ..|....::..:..
Zfish    44 KQLVSAQIPDAIPDPELIELVYCGRKLKDDLTLESYGIQSGSTVHIL----RKSWPEPEIHPEPV 104

  Fly    91 NKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETRPLSSDELIGELAQASLQSRAESNLLM 155
            :|:.:   :::....:.|.||    ||...:||........|.|::|  :|...|.|        
Zfish   105 DKVAA---AREFRVLQAALHT----STAYRESVFKMLNNKESLDQII--VATPGLSS-------- 152

  Fly   156 GDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPS 220
                :...|.:::        ::.:...:.:| ..::.|.|..||........|:.....  :| 
Zfish   153 ----DPVALGVLQ--------DKDLFLQFTDP-NMLDTLANSHPALVNAIILVLHSVAGS--VP- 201

  Fly   221 GPQPASATSAERSTESNSDP-----FEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQ 280
             ||.::::|...|:.|.||.     ||.:....:..|..:  ...|..|.:.|..:   .||.| 
Zfish   202 -PQQSTSSSRNVSSGSYSDMPGGFLFEGMSDDEEDFQSGN--RGGPSTLASGLAGM---RPASL- 259

  Fly   281 LISENQDAFLNMLNQPIDRESESGATVP-PVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSA 344
                                ..:||..| |::.:.:.:.          |.:|::.:.||...:.
Zfish   260 --------------------GYNGAVGPRPITQSELATA----------LALASTPESSAVTPTT 294

  Fly   345 AHQSGSAA--------------DNEDLEQPLGVSTI-RLNRQDKDAIERLKALGF-PEALVLQA 392
            .:|..|:.              .|:.|:|.|.||:: .|:.|.:..:::|:.:|. .|.|:|:|
Zfish   295 GNQGPSSGVSPIPAGTPITNDLFNQALQQALQVSSMSSLHNQWQSQLQQLRDMGIRDEELILRA 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 74/389 (19%)
ubl7aNP_001017765.2 Ubl_UBL7 7..98 CDD:340513 12/57 (21%)
UBA_UBL7 337..374 CDD:270511 6/22 (27%)

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