DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Rad23 and UBQLN3

DIOPT Version :9

Sequence 1:NP_001259052.1 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001334025.1 Gene:UBQLN3 / 50613 HGNCID:12510 Length:655 Species:Homo sapiens


Alignment Length:470 Identity:92/470 - (19%)
Similarity:161/470 - (34%) Gaps:142/470 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITIKN-LQQQTFTIEFAPEKTVLELKKKIFE--ERGPEYVAEKQKLIYAGVILTDDRTVGSYNVD 64
            :|:|. ..::.|::  ....|:.:||::|.:  :..|:.:.    ||:||.||.|..::....| 
Human    24 VTVKTPKDKEDFSV--TDTCTIQQLKEEISQRFKAHPDQLV----LIFAGKILKDPDSLAQCGV- 81

  Fly    65 EKKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETR 129
                      ||..:.:   |.:|..::....:....|:|.:..    ||.|.....|:...:..
Human    82 ----------RDGLTVH---LVIKRQHRAMGNECPAASVPTQGP----SPGSLPQPSSIYPADGP 129

  Fly   130 PLSSDELIGELAQASLQSRA----ESNL-------------LMGDEYNQTVLSMVEMGYPRE--- 174
            |..|..|:..|::..|..|.    .|:|             |:.|.:...:||  ..|..|:   
Human   130 PAFSLGLLTGLSRLGLAYRGFPDQPSSLMRQHVSVPEFVTQLIDDPFIPGLLS--NTGLVRQLVL 192

  Fly   175 ---------QVERAMAASYNNPE---RAVEYLIN------------------------------- 196
                     |....:....||||   :.:|:|.|                               
Human   193 DNPHMQQLIQHNPEIGHILNNPEIMRQTLEFLRNPAMMQEMIRSQDRVLSNLESIPGGYNVLCTM 257

  Fly   197 -----------------GIPAEEGTFYNRLNESTNPSLIPSG---PQPASAT-----SAERSTES 236
                             |.|....|..|....::.||.:.:.   |.|.::|     |.:...:.
Human   258 YTDIMDPMLNAVQEQFGGNPFATATTDNATTTTSQPSRMENCDPLPNPWTSTHGGSGSRQGRQDG 322

  Fly   237 NSDPFEFLRSQPQFLQMRSL------IYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNML-- 293
            :.|..:.....|.||.:..|      :::||..|...||   .|..||.|  |:.....:|.:  
Human   323 DQDAPDIRNRFPNFLGIIRLYDYLQQLHENPQSLGTYLQ---GTASALSQ--SQEPPPSVNRVPP 382

  Fly   294 NQPIDRESESGATVPPVS-----NARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAAHQSGSAAD 353
            :.|..:|..||..:|..|     .:..|:.|    .:..:........:..||.|:   :|.:.:
Human   383 SSPSSQEPGSGQPLPEESVAIKGRSSCPAFL----RYPTENSTGQGGDQDGAGKSS---TGHSTN 440

  Fly   354 NEDLEQPLGVSTIRL 368
            ..||...||.|..|:
Human   441 LPDLVSGLGDSANRV 455

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_001259052.1 rad23 1..413 CDD:273167 92/470 (20%)
RAD23_N 1..76 CDD:176400 16/75 (21%)
UBA1_Rhp23p_like 153..199 CDD:270561 16/121 (13%)
XPC-binding 242..296 CDD:286376 15/61 (25%)
UBA2_HR23A 371..411 CDD:270610
UBQLN3NP_001334025.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..124 6/25 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 277..330 10/52 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 364..399 10/36 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 412..447 7/41 (17%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5272
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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