Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001071146.1 | Gene: | RGD1562433 / 499222 | RGDID: | 1562433 | Length: | 510 | Species: | Rattus norvegicus |
Alignment Length: | 524 | Identity: | 107/524 - (20%) |
---|---|---|---|
Similarity: | 181/524 - (34%) | Gaps: | 152/524 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ITIKNLQ--QQTFTIEFAPEKTVLELKKKIFEERGPEYV---AEKQKLIYAGVILTDDRTVGSYN 62
Fly 63 V-DEKKFIVVMLTRDSSS-------------SNRNQLSVKESNKLTSTDDSK-------QSMPC- 105
Fly 106 -------------------EEANHTNSPSSTNT---EDSVLS-RET--RPLSSDELIGE------ 139
Fly 140 ------------------LAQASLQSRAE----------SNLLMGDEYNQTVLSMVEMGYPREQV 176
Fly 177 ERAMAASYNNPER--AVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPASATSAERSTESNSD 239
Fly 240 PFE------FLRSQPQFLQMR-SLIYQNPHLLH------AVLQQIG----QTNPALLQLISENQD 287
Fly 288 AFLNMLNQ-----PIDRESES--GATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAA 345
Fly 346 HQSGSAADNEDLEQPLGVSTIRLNRQDKDAIERLKALGFP-EALVLQAYFACEKNEEQAANFLLS 409
Fly 410 SSFD 413 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 106/522 (20%) |
RAD23_N | 1..76 | CDD:176400 | 19/78 (24%) | ||
UBA1_Rhp23p_like | 153..199 | CDD:270561 | 8/47 (17%) | ||
XPC-binding | 242..296 | CDD:286376 | 17/75 (23%) | ||
UBA2_HR23A | 371..411 | CDD:270610 | 14/40 (35%) | ||
RGD1562433 | NP_001071146.1 | UBQ | 24..94 | CDD:214563 | 19/75 (25%) |
UBQ | 24..94 | CDD:294102 | 19/75 (25%) | ||
UBA_PLICs | 467..506 | CDD:270582 | 14/39 (36%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |