DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and zgc:56596

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_956594.1 Gene:zgc:56596 / 393270 ZFINID:ZDB-GENE-040426-1089 Length:157 Species:Danio rerio


Alignment Length:161 Identity:40/161 - (24%)
Similarity:67/161 - (41%) Gaps:23/161 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNV-D 64
            ||:|:|.||.:...::....:.|..:|:.:.|..  ...|.:|:|:|.|..|.|:..:..|:: .
Zfish     1 MILTVKPLQGKECNVQVTENEKVSTVKELVSERL--NIPASQQRLLYKGKALADEHRLSDYSIGP 63

  Fly    65 EKKFIVVMLTRDSSSSNRNQLSVKESNK-------LTSTDDSKQSMPCEEANHTNSPSSTNTEDS 122
            |.|..:|:......||.....|...::|       |.||..:|...|.:.|         ..::.
Zfish    64 EAKLNLVVRPAGERSSGAVGTSSANNDKGGSGVWQLLSTVLAKHFSPADAA---------KVQEQ 119

  Fly   123 VL---SRETRPLSSDELIGELAQASLQSRAE 150
            ::   .|..|.||.|: |..||...|....|
Zfish   120 LIKDYERSLRQLSLDD-IERLASRLLHPETE 149

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 40/161 (25%)
zgc:56596NP_956594.1 Ubl_UBL4A_like 1..72 CDD:340505 20/72 (28%)
Tugs 97..143 CDD:465528 14/55 (25%)

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