Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001261383.1 | Gene: | Ubi-p63E / 38456 | FlyBaseID: | FBgn0003943 | Length: | 763 | Species: | Drosophila melanogaster |
Alignment Length: | 455 | Identity: | 94/455 - (20%) |
---|---|---|---|
Similarity: | 160/455 - (35%) | Gaps: | 121/455 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
Fly 66 KKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSST--NTEDSVLSRET 128
Fly 129 RPLSSDELI--GE-------LAQASLQSRAESNLLM----GDEY------NQTVLSMVEMGYPRE 174
Fly 175 QVERAMAASYNN---PERAVEYLINGIPAEEG---TFYNRLNESTNPSL--IPSGPQPASATSAE 231
Fly 232 RSTESNSDPFEFLRSQPQFLQ--------MRSLIY----------------QNPHLLHAVLQQIG 272
Fly 273 QTNPALLQLISENQDAFLNML-NQPIDRESESGATVPPVSNARIPS-TLDNVDLFSPDLEVATSA 335
Fly 336 QRSAAGTSAAHQSGSAADNEDLE-------------------QPLGVSTIRLNRQDKDAIERLKA 381
Fly 382 381 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 94/455 (21%) |
RAD23_N | 1..76 | CDD:176400 | 25/74 (34%) | ||
UBA1_Rhp23p_like | 153..199 | CDD:270561 | 10/58 (17%) | ||
XPC-binding | 242..296 | CDD:286376 | 11/78 (14%) | ||
UBA2_HR23A | 371..411 | CDD:270610 | 5/11 (45%) | ||
Ubi-p63E | NP_001261383.1 | Ubiquitin | 1..76 | CDD:176398 | 25/76 (33%) |
UBQ | 1..72 | CDD:214563 | 24/72 (33%) | ||
Ubiquitin | 77..152 | CDD:176398 | 17/91 (19%) | ||
UBQ | 77..148 | CDD:214563 | 17/87 (20%) | ||
Ubiquitin | 153..228 | CDD:176398 | 15/77 (19%) | ||
UBQ | 153..224 | CDD:214563 | 15/73 (21%) | ||
Ubiquitin | 229..304 | CDD:176398 | 12/86 (14%) | ||
UBQ | 229..300 | CDD:214563 | 10/70 (14%) | ||
Ubiquitin | 305..380 | CDD:176398 | 14/87 (16%) | ||
UBQ | 305..376 | CDD:214563 | 14/83 (17%) | ||
Ubiquitin | 381..456 | CDD:176398 | 9/28 (32%) | ||
UBQ | 381..452 | CDD:214563 | 9/28 (32%) | ||
Ubiquitin | 457..532 | CDD:176398 | |||
UBQ | 457..528 | CDD:214563 | |||
Ubiquitin | 533..608 | CDD:176398 | |||
UBQ | 533..604 | CDD:214563 | |||
Ubiquitin | 609..684 | CDD:176398 | |||
UBQ | 609..680 | CDD:214563 | |||
Ubiquitin | 685..760 | CDD:176398 | |||
UBQ | 685..756 | CDD:214563 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |