Protein Alignment Rad23 and RpS27A

DIOPT Version :9

• Sequence 1: NP_001259052.1
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_476778.1
• Gene: RpS27A / 34420
• FlyBaseID: FBgn0003942
• Length: 156
• Species: Drosophila melanogaster
• Alignment Length: 93
• Identity: 27/93 - (29%)
• Similarity: 49/93 - (52%)
• Gaps: 2/93 - (2%)

  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.|.:|.|..:|.|:|..|..|:..:|.||.::.|  ...::|:||:||..|.|.||:..||:.:
  Fly     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

  Fly    66 KKFIVVMLTRDSSSSNRNQLSVKESNKL 93
            :..:.::|.....:..|.:.:.....|:
  Fly    64 ESTLHLVLRLRGGAKKRKKKNYSTPKKI 91

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_001259052.1	rad23	1..413	CDD:273167	27/93 (29%)
		RAD23_N	1..76	CDD:176400	25/74 (34%)
		UBA1_Rhp23p_like	153..199	CDD:270561
		XPC-binding	242..296	CDD:286376
		UBA2_HR23A	371..411	CDD:270610
RpS27A	NP_476778.1	Ubl_ubiquitin	1..76	CDD:340501	25/76 (33%)
		Ribosomal_S27	103..147	CDD:396259

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900