Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_998521.2 | Gene: | ubqln4 / 334337 | ZFINID: | ZDB-GENE-030131-6269 | Length: | 599 | Species: | Danio rerio |
Alignment Length: | 420 | Identity: | 86/420 - (20%) |
---|---|---|---|
Similarity: | 155/420 - (36%) | Gaps: | 134/420 - (31%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ITIKNLQQQTFTIEFAPEKTVLELKKKI---FEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVD 64
Fly 65 EKKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRET- 128
Fly 129 ----------RPLSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAAS 183
Fly 184 YNNPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPASATSAERSTESNSDPFEFLRSQP 248
Fly 249 QFLQMRSLIYQNPHLLHAV--LQQIGQT-----NPALLQLISENQDAFLNML------------- 293
Fly 294 -----------------NQP---IDRESESGATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRS 338
Fly 339 AAGTSAAHQSGSAADNEDLEQPLGVSTIRL 368 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 86/420 (20%) |
RAD23_N | 1..76 | CDD:176400 | 18/75 (24%) | ||
UBA1_Rhp23p_like | 153..199 | CDD:270561 | 10/45 (22%) | ||
XPC-binding | 242..296 | CDD:286376 | 19/90 (21%) | ||
UBA2_HR23A | 371..411 | CDD:270610 | |||
ubqln4 | NP_998521.2 | UBQ | 26..96 | CDD:214563 | 19/87 (22%) |
hPLIC_N | 26..96 | CDD:176403 | 19/87 (22%) | ||
STI1 | 186..223 | CDD:128966 | 11/70 (16%) | ||
UBA_PLICs | 556..595 | CDD:270582 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |