DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and LOC3290537

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_550846.4 Gene:LOC3290537 / 3290537 VectorBaseID:AGAMI1_000134 Length:685 Species:Anopheles gambiae


Alignment Length:455 Identity:94/455 - (20%)
Similarity:160/455 - (35%) Gaps:121/455 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.|.:|.|..:|.|:|..|..|:..:|.||.::.|  ...::|:||:||..|.|.||:..||:.:
Mosquito     1 MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEG--IPPDQQRLIFAGKQLEDGRTLSDYNIQK 63

  Fly    66 KKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSST--NTEDSVLSRET 128
            :..:.::|......    |:.||.....|.|.:.:             ||.|  |.:..:..:|.
Mosquito    64 ESTLHLVLRLRGGM----QIFVKTLTGKTITLEVE-------------PSDTIENVKAKIQDKEG 111

  Fly   129 RPLSSDELI--GE-------LAQASLQSRAESNLLM----GDEY------NQTVLSMVEMGYPRE 174
            .|.....||  |:       |:..::|..:..:|::    |.:.      .:|:...||   |.:
Mosquito   112 IPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVE---PSD 173

  Fly   175 QVERAMAASYNN---PERAVEYLINGIPAEEG---TFYNRLNESTNPSL--IPSGPQPASATSAE 231
            .:|...|...:.   |......:..|...|:|   :.||...|||...:  :..|.|....|...
Mosquito   174 TIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTG 238

  Fly   232 RSTESNSDPFEFLRSQPQFLQ--------MRSLIY----------------QNPHLLHAVLQQIG 272
            ::.....:|.:.:.:....:|        .:.||:                |....||.||:..|
Mosquito   239 KTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG 303

  Fly   273 QTNPALLQLISENQDAFLNML-NQPIDRESESGATVPPVSNARIPS-TLDNVDLFSPDLEVATSA 335
                        ....|:..| .:.|..|.|             || |::||.....|.|.....
Mosquito   304 ------------GMQIFVKTLTGKTITLEVE-------------PSDTIENVKAKIQDKEGIPPD 343

  Fly   336 QRSAAGTSAAHQSGSAADNEDLE-------------------QPLGVSTIRLNRQDKDAIERLKA 381
            |:.........:.|....:.:::                   :.|...||.|..:..|.||.:||
Mosquito   344 QQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGGMQIFVKTLTGKTITLEVEPSDTIENVKA 408

  Fly   382  381
            Mosquito   409  408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 94/455 (21%)
LOC3290537XP_550846.4 None

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