DRSC - DRSC Integrative Ortholog Prediction Tool

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Protein Alignment Rad23 and CG31528

DIOPT Version :9

Sequence 1:	NP_001259052.1	Gene:	Rad23 / 43785	FlyBaseID:	FBgn0026777	Length:	414	Species:	Drosophila melanogaster
Sequence 2:	NP_730833.1	Gene:	CG31528 / 318785	FlyBaseID:	FBgn0051528	Length:	344	Species:	Drosophila melanogaster

Alignment Length:	279	Identity:	61/279 - (21%)
Similarity:	108/279 - (38%)	Gaps:	81/279 - (29%)

- Green bases have known domain annotations that are detailed below.

  Fly   131 LSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEYLI 195
            :|:.|.|...|:.|  .|.|:..|..:|..:.:..:|.:.:     |:|::       |.:....
  Fly     1 MSTKESIDICAKGS--GRVETVTLRQNELIRNLRVLVAVRF-----EQAIS-------RIILVFA 51

  Fly   196 NGIPAEEGTFYN-------------RLNESTNPSLIPSGPQPASATSAERSTESNSDPFEFLRSQ 247
            ..:.::|||..:             |...:.:||     |.|.:||.               ||:
  Fly    52 GQVLSDEGTIDSRGIVSGVTVHVVCRAEAANSPS-----PTPIAATK---------------RSK 96

  Fly   248 PQFLQMRSLIYQNPHLLHA-----VLQQIGQTNPALLQLISENQDAFLNMLNQPID-RESESGAT 306
            |....|||  :|:.|:...     ||:.:.|.:|.:..|:.||. |..:.||...: ||..|.|.
  Fly    97 PSERLMRS--WQSAHIAFLQQEPDVLRSLLQADPRIRSLLDENA-AMRHYLNSDQNLREMLSLAF 158

  Fly   307 VPPVSNA------------------RIPSTLDNVDLFSPDLEVATSAQRSAAG--TSAAHQSGSA 351
            .|.....                  ::.|.|:...|.:.:..||.:.|:::.|  ||:..|.|.
  Fly   159 SPAKQELGRRRDLHISRMEFVPGGYKVLSRLNYCMLQAYEDNVAMAFQQASQGAKTSSNPQRGL- 222

  Fly   352 ADNEDLEQPLGVSTIRLNR 370
                :::.||....:|:.|
  Fly   223 ----EVKDPLPNPWLRMPR 237

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_001259052.1	rad23	1..413	CDD:273167	61/279 (22%)
		RAD23_N	1..76	CDD:176400
		UBA1_Rhp23p_like	153..199	CDD:270561	6/45 (13%)
		XPC-binding	242..296	CDD:286376	18/58 (31%)
		UBA2_HR23A	371..411	CDD:270610	61/279 (22%)
CG31528	NP_730833.1	UBQ	7..77	CDD:294102	14/83 (17%)
CG31528	NP_730833.1	UBA_like_SF	299..335	CDD:304366
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
	1	0.900