Protein Alignment Rad23 and Ubqln4

DIOPT Version :10

• Sequence 1: NP_651918.2
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_001101158.1
• Gene: Ubqln4 / 310633
• RGDID: 1308273
• Length: 595
• Species: Rattus norvegicus
• Alignment Length: 597
• Identity: 117/597 - (19%)
• Similarity: 191/597 - (31%)
• Gaps: 208/597 - (34%)

  Fly     3 ITIKNLQQQTFTIEFAPEKTVLELKKKI---FEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVD 64
            :|:|..:.:. .|....:.:|.|.|::|   |:.:..:.|     ||:||.||.|..|:..:.:.
  Rat    15 VTVKTPKDKE-EILICDQASVKEFKEEISRRFKAQQDQLV-----LIFAGKILKDGDTLNQHGIK 73

  Fly    65 EKKFIVVML-----TRDSSSSNRNQLSVKESNKLTSTDDSKQS---MPCEEANHTNSPSS----- 116
            :...:.:::     .:|..::..:..|..:|....||..:..:   .||...|.|:..||
  Rat    74 DGLTVHLVIKTPQKAQDPVTTTASSPSTPDSASAPSTTPASPAAPVQPCSSGNTTSDASSGGGPS 138

  Fly   117 -------TNTEDSVLSRETRPLSSDEL-IGELAQASLQSRAESNLLMGDEY------NQTVLSMV 167
                   :|...|:||.....|....| :|......||.:.:..|:...|.      |..|..|:
  Rat   139 PVAAEGPSNATASILSGFGGILGLGSLGLGSANFMELQQQMQRQLMSNPEMLSQIMENPLVQDMM 203

  Fly   168 E---------MGYPREQ--VERAMAASY--NNPE-----------------------RAVEYLIN 196
            .         |..|:.|  :||....|:  ||||                       ||:..| .
  Rat   204 SNPDLMRHMIMANPQMQQLMERNPEISHMLNNPELMRQTMELARNPAMMQEMMRNQDRALSNL-E 267

  Fly   197 GIPAEEGTFYNRL----------------------------------------NESTNPSLIPSG 221
            .:|..    ||.|                                        .|:..|...|..
  Rat   268 SVPGG----YNALRRMYTDIQEPMFTAAREQFGNNPFSSLAGNSDNSSSQPLRTENREPLPNPWS 328

  Fly   222 PQP--------------ASATSAERSTESNSDPFEF--------LRSQPQFLQMRSLIYQNPHLL 264
            |.|              .|.||....|.||  ||..        :.:.|:...:...|.:||.|:
  Rat   329 PSPPTSQAPGSGGEGTGGSGTSQVHPTVSN--PFGINAASLGSGMFNSPEMQALLQQISENPQLM 391

  Fly   265 HAV---------LQQIGQT----------------NPALLQLISENQDAFLNMLNQP-------- 296
            ..|         :|.:.|.                ||.|.:.:......||..:..|
  Rat   392 QNVISAPYMRTMMQTLAQNPDFAAQMMVNVPLFAGNPQLQEQLRLQLPVFLQQMQNPESLSILTN 456

  Fly   297 ---------IDR-----ESESGATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAA-- 345
                     |.:     ::|:...||.:.:...|.|  :|.|...:...|..|..::.||.|.
  Rat   457 PRAMQALLQIQQGLQTLQTEAPGLVPSLGSFGTPRT--SVPLAGSNSGSAAEAPTASPGTPATTP 519

  Fly   346 HQSGSAADNEDLEQ-----------PLGVSTIRLNRQDKDAIERLKALGFPEALV-LQAYFACEK 398
            ..:||....:.::|           .:.|..:|..:|    :|:|.::||..... |||..|...
  Rat   520 PSAGSNTQQQLMQQMIQLLSGSGNSQVPVPEVRFQQQ----LEQLNSMGFVNREANLQALIATGG 580

  Fly   399 NEEQAANFLLSS 410
            :...|...||.|
  Rat   581 DINAAIERLLGS 592

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_651918.2	rad23	1..413	CDD:273167	117/597 (20%)
Ubqln4	NP_001101158.1	Ubl_PLICs	11..83	CDD:340506	17/73 (23%)
		PRK10856	<84..>151	CDD:236776	12/66 (18%)
		STI1	186..234	CDD:450205	10/47 (21%)
		STI1	216..260	CDD:450205	9/43 (21%)
		STI1	<371..407	CDD:450205	7/35 (20%)
		UBA_PLICs	552..591	CDD:270582	12/42 (29%)