Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001101158.1 | Gene: | Ubqln4 / 310633 | RGDID: | 1308273 | Length: | 595 | Species: | Rattus norvegicus |
Alignment Length: | 597 | Identity: | 117/597 - (19%) |
---|---|---|---|
Similarity: | 191/597 - (31%) | Gaps: | 208/597 - (34%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 ITIKNLQQQTFTIEFAPEKTVLELKKKI---FEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVD 64
Fly 65 EKKFIVVML-----TRDSSSSNRNQLSVKESNKLTSTDDSKQS---MPCEEANHTNSPSS----- 116
Fly 117 -------TNTEDSVLSRETRPLSSDEL-IGELAQASLQSRAESNLLMGDEY------NQTVLSMV 167
Fly 168 E---------MGYPREQ--VERAMAASY--NNPE-----------------------RAVEYLIN 196
Fly 197 GIPAEEGTFYNRL----------------------------------------NESTNPSLIPSG 221
Fly 222 PQP--------------ASATSAERSTESNSDPFEF--------LRSQPQFLQMRSLIYQNPHLL 264
Fly 265 HAV---------LQQIGQT----------------NPALLQLISENQDAFLNMLNQP-------- 296
Fly 297 ---------IDR-----ESESGATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAA-- 345
Fly 346 HQSGSAADNEDLEQ-----------PLGVSTIRLNRQDKDAIERLKALGFPEALV-LQAYFACEK 398
Fly 399 NEEQAANFLLSS 410 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 117/597 (20%) |
RAD23_N | 1..76 | CDD:176400 | 17/80 (21%) | ||
UBA1_Rhp23p_like | 153..199 | CDD:270561 | 18/87 (21%) | ||
XPC-binding | 242..296 | CDD:286376 | 13/86 (15%) | ||
UBA2_HR23A | 371..411 | CDD:270610 | 13/41 (32%) | ||
Ubqln4 | NP_001101158.1 | UBQ | 13..83 | CDD:214563 | 17/73 (23%) |
hPLIC_N | 13..83 | CDD:176403 | 17/73 (23%) | ||
STI1 | 186..223 | CDD:128966 | 7/36 (19%) | ||
UBA_PLICs | 552..591 | CDD:270582 | 12/42 (29%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.810 |