DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and Oasl

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001009681.1 Gene:Oasl / 304545 RGDID:1308586 Length:512 Species:Rattus norvegicus


Alignment Length:73 Identity:19/73 - (26%)
Similarity:38/73 - (52%) Gaps:4/73 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKK 67
            :.:||....:......|...||.||::|.:.:|.:  :::|:|.:.|.:|.|.....||.:.:. 
  Rat   433 VFVKNPDGGSHAYAIHPLDFVLSLKQQIEDRQGLQ--SQEQQLEFQGRVLEDWFDFKSYGIQDS- 494

  Fly    68 FIVVMLTR 75
             |.::|:|
  Rat   495 -ITIILSR 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 19/73 (26%)
OaslNP_001009681.1 NT_2-5OAS_ClassI-CCAase 29..209 CDD:143390
OAS1_C 167..348 CDD:463087
Ubl1_OASL 351..424 CDD:340509
Ubl1_cv_Nsp3_N-like 430..501 CDD:475130 18/71 (25%)
Blue background indicates that the domain is not in the aligned region.

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