Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001013921.1 | Gene: | Ubqlnl / 293287 | RGDID: | 1307202 | Length: | 612 | Species: | Rattus norvegicus |
Alignment Length: | 481 | Identity: | 93/481 - (19%) |
---|---|---|---|
Similarity: | 167/481 - (34%) | Gaps: | 129/481 - (26%) |
- Green bases have known domain annotations that are detailed below.
Fly 10 QQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYA--GVILTDDRTVGSYNVDEKKFIVVM 72
Fly 73 LTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETRPLSSDELI 137
Fly 138 GELAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEYLINGIPAEE 202
Fly 203 GTFYNRLNESTNPSL-------------------------IPSGPQPASATSAERSTESNSDPFE 242
Fly 243 FLRSQPQFLQMRSLIYQ--NPHLLHA-------------------VLQQIGQTNPALLQLISENQ 286
Fly 287 DAFLNMLNQPIDRESESGATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAAHQ---- 347
Fly 348 ----------------------SGSAAD--NEDLEQPLGVSTIRLNRQDKDAIERLKALGFPEAL 388
Fly 389 VLQAYFACEKNEEQAANFLLSSSFDD 414 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 92/478 (19%) |
RAD23_N | 1..76 | CDD:176400 | 14/67 (21%) | ||
UBA1_Rhp23p_like | 153..199 | CDD:270561 | 8/45 (18%) | ||
XPC-binding | 242..296 | CDD:286376 | 16/74 (22%) | ||
UBA2_HR23A | 371..411 | CDD:270610 | 7/39 (18%) | ||
Ubqlnl | NP_001013921.1 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..25 | ||
UBQ | 31..101 | CDD:214563 | 14/68 (21%) | ||
UBQ | 31..101 | CDD:294102 | 14/68 (21%) | ||
UBA_PLICs | 569..606 | CDD:270582 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 0.900 |