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Protein Alignment Rad23 and Ubd
DIOPT Version :9
Sequence 1: | NP_001259052.1 |
Gene: | Rad23 / 43785 |
FlyBaseID: | FBgn0026777 |
Length: | 414 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_445751.2 |
Gene: | Ubd / 29168 |
RGDID: | 69418 |
Length: | 161 |
Species: | Rattus norvegicus |
Alignment Length: | 112 |
Identity: | 25/112 - (22%) |
Similarity: | 42/112 - (37%) |
Gaps: | 26/112 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 EKTVLELKKKIFEE-RGPEYVA-EKQKLIYAGVILTDDRTVGSYNVDEKKFI------------- 69
:.|:.:..|||.|. |....|: :.|.|:....||...|.:.||.:|::..|
Rat 19 DTTMSDKVKKINEHIRSQTKVSVQDQILLLDSKILKPHRALSSYGIDKENTIHLTLKVVKPSDEE 83
Fly 70 -VVMLTRDSSSSNRNQLSVKESN----------KLTSTDDSKQSMPC 105
.:.|........|:.|.|:.|: .:|:....||.:.|
Rat 84 LPLSLVESGDEGQRHLLRVRRSSSVAQVKEMIENVTAVPPKKQFVNC 130
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5272 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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