Protein Alignment Rad23 and Zfand4

DIOPT Version :9

• Sequence 1: NP_001259052.1
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: XP_038963095.1
• Gene: Zfand4 / 286998
• RGDID: 628707
• Length: 815
• Species: Rattus norvegicus
• Alignment Length: 416
• Identity: 84/416 - (20%)
• Similarity: 138/416 - (33%)
• Gaps: 135/416 - (32%)

  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.:.|:.|....|.:..:|.:.|:.:|.||....|....  :|.||:..:.|.||..:..||:.|
  Rat    72 MELFIETLTGTCFELRVSPFEAVISVKGKIQRLEGIPIC--QQHLIWNNMELEDDYCLNDYNISE 134

  Fly    66 KKFIVVMLTRDSSSSNRNQLSVKES-NKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVL-SRET 128
            ...:.::|.......:..::.|::. .:|....||.:....|:       :|.|.:.:.| .||.
  Rat   135 GCTLKLVLAMRGGPISTRKVPVEDPLRELAEYMDSSRDEVWEK-------TSCNKQVTFLVYREG 192

  Fly   129 RPLSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEY 193
            ..|:...:: :....:|...:|| |..|..||.         |..|..|...:.|   .::.:|.
  Rat   193 DQLNFFRVV-DRGDGTLTPLSES-LSGGSVYNL---------YTDEDEETEPSPS---GQQIIEN 243

  Fly   194 LI--NGIPAEEGTFYNRLNESTNPSLI-------PSGPQPASATSAERSTESNSDPFEFLRSQPQ 249
            .|  |.:...:....| :|.|..|..:       |..|:|:|:::|...
  Rat   244 SITMNKMKLLKAKMEN-MNLSKKPKKVVKVKPRPPIAPRPSSSSAAAAR---------------- 291

  Fly   250 FLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATVPPVSNAR 314
                        |.|..||..|||                                :..|..||.
  Rat   292 ------------HRLLRVLPHIGQ--------------------------------SCLPSGNAY 312

  Fly   315 IPSTLDNVDLFSPDLEVATSAQRSAAGTSAAHQSGSAADNEDLEQPL--------------GVST 365
            :|.|..|                  ||||:|.|:.:......|...|              ..|:
  Rat   313 VPETSRN------------------AGTSSAAQAPADRPMPSLRSELLKDDGNWERNMLSHSTSS 359

  Fly   366 IRLNRQ--------DKDAIERLKALG 383
            |||..|        ||:..:.:..||
  Rat   360 IRLLPQLTHLDLENDKELPDSVLHLG 385

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_001259052.1	rad23	1..413	CDD:273167	84/416 (20%)
		RAD23_N	1..76	CDD:176400	20/74 (27%)
		UBA1_Rhp23p_like	153..199	CDD:270561	11/47 (23%)
		XPC-binding	242..296	CDD:286376	7/53 (13%)
		UBA2_HR23A	371..411	CDD:270610	5/21 (24%)
Zfand4	XP_038963095.1	Ubl_ZFAND4	72..145	CDD:340500	20/74 (27%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900