DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment Rad23 and Oas1g

DIOPT Version :9

Sequence 1:	NP_001259052.1	Gene:	Rad23 / 43785	FlyBaseID:	FBgn0026777	Length:	414	Species:	Drosophila melanogaster
Sequence 2:	NP_035982.2	Gene:	Oas1g / 23960	MGIID:	97429	Length:	367	Species:	Mus musculus

Alignment Length:	119	Identity:	24/119 - (20%)
Similarity:	48/119 - (40%)	Gaps:	24/119 - (20%)

- Green bases have known domain annotations that are detailed below.

  Fly   178 RAMAASYNNPERAVEYLINGIPAEEGTFYNRLNESTNP-----------SLIPSGPQPASATSAE 231
            |:::...:.|....|...:.:||.:...:..:|:..||           ||...|......|..:
Mouse   131 RSLSFKLSAPHLHQEVEFDVLPAFDVLGHGSINKKPNPLIYTILIWECTSLGKDGEFSTCFTELQ 195

  Fly   232 RSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPA--LLQLIS 283
            |:         ||:.:|  .:::|||....|......:::|:..|.  .|:|::
Mouse   196 RN---------FLKQRP--TKLKSLIRLVKHWYQLCKEKLGKPLPPQYALELLT 238

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_001259052.1	rad23	1..413	CDD:273167	24/119 (20%)
		RAD23_N	1..76	CDD:176400
		UBA1_Rhp23p_like	153..199	CDD:270561	3/20 (15%)
		XPC-binding	242..296	CDD:286376	11/44 (25%)
		UBA2_HR23A	371..411	CDD:270610
Oas1g	NP_035982.2	NT_2-5OAS_ClassI-CCAase	29..172	CDD:143390	8/40 (20%)
Oas1g	NP_035982.2	OAS1_C	164..348	CDD:287404	18/86 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5272
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900