DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and Rad23a

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001365823.1 Gene:Rad23a / 19358 MGIID:105126 Length:367 Species:Mus musculus


Alignment Length:429 Identity:167/429 - (38%)
Similarity:223/429 - (51%) Gaps:84/429 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPE-YVAEKQKLIYAGVILTDDRTVGSYNVDEK 66
            ||:|.||||||.|...|::||..||:||..|:|.: :....|||||||.||:||..:..|::|||
Mouse     5 ITLKTLQQQTFKIRMEPDETVKVLKEKIEAEKGRDAFPVAGQKLIYAGKILSDDVPIKEYHIDEK 69

  Fly    67 KFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETRPL 131
            .|:|||:|:..:...   :........|:..:.....|...|:..:.|..|:.||...|.|:...
Mouse    70 NFVVVMVTKAKAGQG---IPAPPEASPTAVPEPSTPFPPVLASGMSHPPPTSREDKSPSEESTTT 131

  Fly   132 SSDELI-GELAQASLQSRAE---SNLLMGDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVE 192
            :|.|.| |.:..:....|.|   |.|:.|.||...:..::.|||.||:|..|:.||||||.||||
Mouse   132 TSPESISGSVPSSGSSGREEDAASTLVTGSEYETMLTEIMSMGYERERVVAALRASYNNPHRAVE 196

  Fly   193 YLINGIPAEEGTFYNRLNESTNPSLIPSGPQPASATSAERSTESNSDPFEFLRSQPQFLQMRSLI 257
            ||:.|||......:..:.||..|.      |||:..:.|       :|.||||.||||..||.:|
Mouse   197 YLLTGIPGSPEPEHGSVQESQAPE------QPATEAAGE-------NPLEFLRDQPQFQNMRQVI 248

  Fly   258 YQNPHLLHAVLQQIGQTNPALLQL----ISENQDAFLNMLNQPIDRESESGATVPPVSNARIPST 318
            .|||.||.|:|||:||.||.|||:    ||.:|:.|:.|||:|                      
Mouse   249 QQNPALLPALLQQLGQENPQLLQVRPRQISRHQEQFIQMLNEP---------------------- 291

  Fly   319 LDNVDLFSPDLEVATSAQRSAAGTSAAHQSGSAADNEDLEQPLG--------VSTIRLNRQDKDA 375
                                         .|..||..|:|..:|        ::.|::..|:|:|
Mouse   292 -----------------------------PGELADISDVEGEVGAIGEEAPQMNYIQVTPQEKEA 327

  Fly   376 IERLKALGFPEALVLQAYFACEKNEEQAANFLLSSSFDD 414
            |||||||||||:||:||||||||||..|||||||.:|||
Mouse   328 IERLKALGFPESLVIQAYFACEKNENLAANFLLSQNFDD 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 164/426 (38%)
Rad23aNP_001365823.1 rad23 3..365 CDD:273167 164/426 (38%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 83..160 17/79 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 201..227 9/31 (29%)

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