DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and C16C8.4

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_494542.1 Gene:C16C8.4 / 182671 WormBaseID:WBGene00015842 Length:226 Species:Caenorhabditis elegans


Alignment Length:60 Identity:14/60 - (23%)
Similarity:27/60 - (45%) Gaps:2/60 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 TFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKKFIVV 71
            ::..:...|.||.::|..|  |...:.......|.::|..|.|..::|.||:.:...|.:
 Worm   164 SYAFKIHREDTVFDIKNDI--EHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTITM 221

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 14/60 (23%)
C16C8.4NP_494542.1 UBQ 154..224 CDD:214563 14/60 (23%)

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