Protein Alignment Rad23 and C16C8.11

DIOPT Version :10

• Sequence 1: NP_651918.2
• Gene: Rad23 / 43785
• FlyBaseID: FBgn0026777
• Length: 414
• Species: Drosophila melanogaster
• Sequence 2: NP_494548.1
• Gene: C16C8.11 / 173690
• WormBaseID: WBGene00015849
• Length: 214
• Species: Caenorhabditis elegans
• Alignment Length: 216
• Identity: 45/216 - (20%)
• Similarity: 83/216 - (38%)
• Gaps: 50/216 - (23%)

  Fly     6 KNLQQQTFTIEFAPEKTVLELKKKIFEERGPE-------YVAEKQKLIYAGVILTDDRTVGSYNV 63
            :.|||:|..|:....|..|....|:.|.|..:       .:.||||:        .|.|:.
 Worm    12 QKLQQETSKIQSHLTKDFLSSSAKLSENRVLQATQELCGKLTEKQKV--------QDDTIN---- 64

  Fly    64 DEKKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRET 128
                  :::........|:|::..:.::..:..|..|:.....|            .|.:   :.
 Worm    65 ------LLLSALGQIQENQNKILNQFASMQSQLDIVKRRQDAYE------------RDLI---QQ 108

  Fly   129 RPLSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEY 193
            :|...::.:||.::.|.:| |||.|    :|.:|...:|::........|..:...|..| :||.
 Worm   109 KPSVPEQKVGESSKKSPRS-AESAL----KYVETCTKVVDLCIAVSMPGRLFSIGANKME-SVEQ 167

  Fly   194 LINGIPAEEG----TFYNRLN 210
            |...|..:.|    .|:.||:
 Worm   168 LKMKIECQTGIPRTKFWLRLH 188

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rad23	NP_651918.2	rad23	1..413	CDD:273167	45/216 (21%)
C16C8.11	NP_494548.1	COG5391	<9..>111	CDD:227680	22/131 (17%)
		ubiquitin	149..212	CDD:459726	11/41 (27%)