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Protein Alignment Rad23 and F52C6.2
DIOPT Version :9
Sequence 1: | NP_001259052.1 |
Gene: | Rad23 / 43785 |
FlyBaseID: | FBgn0026777 |
Length: | 414 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_494128.3 |
Gene: | F52C6.2 / 173558 |
WormBaseID: | WBGene00018659 |
Length: | 228 |
Species: | Caenorhabditis elegans |
Alignment Length: | 186 |
Identity: | 39/186 - (20%) |
Similarity: | 62/186 - (33%) |
Gaps: | 82/186 - (44%) |
- Green bases have known domain annotations that are detailed below.
Fly 1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
|:::||....:|.|:| ||:....| |..||.:::| .||:.|
Worm 1 MLLSIKTSTGKTITVE-APKSVKTE-------------VRYKQGVVFA----------VSYDKD- 40
Fly 66 KKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRETRP 130
..|::...:|:.|.:..:|| :..|
Worm 41 -----------------------AGNQIIEMEDTVQDVKIQEA------------------QQAP 64
Fly 131 L-SSDELIGE--LAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAAS 183
| .|:|:.|: ..:||..:|.|.|..:. |.|.|.|.|..|||
Worm 65 LRESEEVTGDPIKVEASDTNRNEENPDLA-------------GPPAEPVIRGTAAS 107
|
Known Domains:
Indicated by green bases in alignment.
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5272 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
0 | 0.000 |
Not matched by this tool. |
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
1 | 0.900 |
|
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