DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and LOC1281153

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_321092.3 Gene:LOC1281153 / 1281153 VectorBaseID:AGAMI1_010060 Length:309 Species:Anopheles gambiae


Alignment Length:117 Identity:31/117 - (26%)
Similarity:53/117 - (45%) Gaps:17/117 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.|.:|.|..:|..::..||.||..:||:|.|..  |....:|::|:||..|.|.|.:..|::.:
Mosquito     1 MQIFVKMLTGKTIAVDTEPEATVESVKKQIDERE--EIPPNQQRMIFAGKQLEDGRQLQEYSIIK 63

  Fly    66 -------------KKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMP 104
                         .:..|.|||..:.:.:....:..||.|  ...|.::.:|
Mosquito    64 GSTIHLVLRLKGGMQIFVKMLTGKTIAVDTEPEATVESVK--KQIDEREEIP 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 31/117 (26%)
LOC1281153XP_321092.3 Ubl1_cv_Nsp3_N-like 1..76 CDD:475130 22/76 (29%)
Ubl1_cv_Nsp3_N-like 77..152 CDD:475130 9/39 (23%)
Ubl1_cv_Nsp3_N-like 153..228 CDD:475130
Ubl1_cv_Nsp3_N-like 229..304 CDD:475130
Blue background indicates that the domain is not in the aligned region.

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