DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and LOC1274090

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:XP_313162.6 Gene:LOC1274090 / 1274090 VectorBaseID:AGAMI1_009806 Length:438 Species:Anopheles gambiae


Alignment Length:416 Identity:83/416 - (19%)
Similarity:143/416 - (34%) Gaps:148/416 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 ITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDEKK 67
            |.:.::||.......||:..:|                                      |:..:
Mosquito   154 ILLSSMQQPEMVRRVAPKHPIL--------------------------------------VEASR 180

  Fly    68 FIVVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEAN----HTNSPSSTNTEDSVLSRET 128
            .||.:|       |...:|...:..|::..||....|..:::    :|.||:::...:::     
Mosquito   181 TIVQLL-------NSKMISKVANCHLSAPLDSALDDPLTDSSSSDENTASPTTSAAPNTI----- 233

  Fly   129 RPLSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGYPREQVERAMAASYNNPERAVEY 193
            |.:::|.|...||.|..:|          .||.  ||.:..   |:...||     |.||     
Mosquito   234 RRITADNLASALAFAGSRS----------SYNS--LSNISQ---RDADSRA-----NQPE----- 273

  Fly   194 LINGIPAEEGTFYNRLNESTNPSLIPSGPQPASATSAERSTESNSDPFEFLRSQPQFLQMRSLIY 258
                 |..||      :..|..|:..:.|..::|..:.:.|.|:                     
Mosquito   274 -----PTGEG------SAGTGTSVAANLPSTSAAAGSNQPTTSS--------------------- 306

  Fly   259 QNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQPIDRESESGATVP----PVSNARIPSTL 319
                  :|...:|  |:..||       ||...|..|   :.|.||.:..    .||:.|:|:.:
Mosquito   307 ------NAAAGRI--TSSMLL-------DAISMMFEQ---QASGSGGSTAGSSGAVSSQRVPTVV 353

  Fly   320 DNVDLFSPDLEVATSAQRSAAGTSAAHQSGSAADNEDLEQ--PLGVSTIRLNRQDKDAIERLKAL 382
            :.:|. ||       |..:.||.:|....|:....:.|.|  .|..|..:..|:    ::.::.:
Mosquito   354 EPMDT-SP-------APPTTAGATAPEPMGNDLGAQTLSQHSTLAASIGQYRRE----LDTMREM 406

  Fly   383 GFPEALV-LQAYFACEKNEEQAANFL 407
            |..:... |||...|..|.|.|.|.:
Mosquito   407 GLTDTETNLQALIVCNGNVESAVNLV 432

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 83/416 (20%)
LOC1274090XP_313162.6 None

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