| Sequence 1: | NP_001259052.1 | Gene: | Rad23 / 43785 | FlyBaseID: | FBgn0026777 | Length: | 414 | Species: | Drosophila melanogaster |
|---|---|---|---|---|---|---|---|---|---|
| Sequence 2: | NP_446199.2 | Gene: | Ubqln1 / 114590 | RGDID: | 620745 | Length: | 582 | Species: | Rattus norvegicus |
| Alignment Length: | 594 | Identity: | 132/594 - (22%) |
|---|---|---|---|
| Similarity: | 214/594 - (36%) | Gaps: | 226/594 - (38%) |
- Green bases have known domain annotations that are detailed below.
|
Fly 1 MIITIKNLQQQTFTIEFA-PEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVD 64
Fly 65 EKKFI-VVMLTRDSSSSNRNQLSVKESNKLTSTDDSKQSMPCEEANHTNSPSSTNTEDSVLSRET 128
Fly 129 RPLSSDEL--IGELAQAS-----------LQSRAESNLLMGDEY------NQTVLSMVE------ 168
Fly 169 ---MGYPREQ--VERAMAASY--NNP-----------------------ERAV------------ 191
Fly 192 ---------EYLIN-------GIP---------AEEGTFYNRLNESTNPSLIPSGPQPASATSAE 231
Fly 232 RSTES------------NSDPFEFLRSQPQFLQ-----------MRSLIYQ---NPHLLHAVLQQ 270
Fly 271 IGQTNP---ALLQLISENQD-AFLNMLNQPID------------------RESESGATVPPVSNA 313
Fly 314 RIPSTLDNVDL---------------FSPDLEVATSAQRSAAGTSA--------AHQSGSAAD-- 353
Fly 354 ---------------NEDLEQPLGVSTIRLNRQDKDAIERLKALGF--PEALVLQAYFACEKNEE 401
Fly 402 QAANFLLSS 410 |
| Gene | Sequence | Domain | Region | External ID | Identity |
|---|---|---|---|---|---|
| Rad23 | NP_001259052.1 | rad23 | 1..413 | CDD:273167 | 132/594 (22%) |
| RAD23_N | 1..76 | CDD:176400 | 20/76 (26%) | ||
| UBA1_Rhp23p_like | 153..199 | CDD:270561 | 20/115 (17%) | ||
| XPC-binding | 242..296 | CDD:286376 | 19/71 (27%) | ||
| UBA2_HR23A | 371..411 | CDD:270610 | 16/42 (38%) | ||
| Ubqln1 | NP_446199.2 | Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1..26 | ||
| UBQ | 28..98 | CDD:214563 | 19/73 (26%) | ||
| hPLIC_N | 28..98 | CDD:176403 | 19/73 (26%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 102..136 | 10/54 (19%) | |||
| Interaction with UBXN4. /evidence=ECO:0000250|UniProtKB:Q9UMX0 | 169..422 | 56/258 (22%) | |||
| STI1 | 173..210 | CDD:128966 | 8/36 (22%) | ||
| TFIIA | 285..>447 | CDD:281188 | 37/167 (22%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 285..365 | 18/80 (23%) | |||
| STI1 | 384..416 | CDD:128966 | 11/36 (31%) | ||
| Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 481..513 | 9/33 (27%) | |||
| UBA_PLICs | 539..578 | CDD:270582 | 15/43 (35%) | ||
| Blue background indicates that the domain is not in the aligned region. | |||||
| Tool | Simple Score | Weighted Score | Original Tool Information | |||
|---|---|---|---|---|---|---|
| BLAST Result | Score | Score Type | Cluster ID | |||
| Compara | 0 | 0.000 | Not matched by this tool. | |||
| Domainoid | 0 | 0.000 | Not matched by this tool. | |||
| eggNOG | 1 | 0.900 | - | - | E1_COG5272 | |
| Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
| Homologene | 0 | 0.000 | Not matched by this tool. | |||
| Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
| OMA | 0 | 0.000 | Not matched by this tool. | |||
| OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
| OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
| OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
| orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
| Panther | 0 | 0.000 | Not matched by this tool. | |||
| Phylome | 0 | 0.000 | Not matched by this tool. | |||
| SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
| SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
| TreeFam | 0 | 0.000 | Not matched by this tool. | |||
| 1 | 0.900 | |||||