DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rad23 and zfand4

DIOPT Version :10

Sequence 1:NP_651918.2 Gene:Rad23 / 43785 FlyBaseID:FBgn0026777 Length:414 Species:Drosophila melanogaster
Sequence 2:NP_001189400.1 Gene:zfand4 / 100148477 ZFINID:ZDB-GENE-090312-102 Length:673 Species:Danio rerio


Alignment Length:497 Identity:97/497 - (19%)
Similarity:160/497 - (32%) Gaps:185/497 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MIITIKNLQQQTFTIEFAPEKTVLELKKKIFEERGPEYVAEKQKLIYAGVILTDDRTVGSYNVDE 65
            |.:.|:.|....|.:..:|.:.|:.:|.||  :|.......:|.||:.|:.|.|:..:..|::.|
Zfish    28 MELFIETLTGTCFQLRVSPFEQVVSVKAKI--QRLEGIPVSQQHLIWNGMELEDEYCLHDYSITE 90

  Fly    66 KKFIVVMLTRDSSSSNRNQLSVKESNKLTSTDDS----------------KQSMP--------CE 106
            ...:.::|.......|        :.::|.||||                ::|:|        ..
Zfish    91 GCTLKLVLAMRGGPVN--------TRRVTVTDDSVRDISDCLDAGREEMWEKSLPNKQVTFLVYR 147

  Fly   107 EANHTNSPSSTNTEDSVLSRETRPLSSDELIGELAQASLQSRAESNLLMGDEYNQTVLSMVEMGY 171
            |.:..|.....:..|..|:..:..||...:....|:...:..:.|:.|      ||:.:.:.|| 
Zfish   148 EGDQLNFFRVVDRGDGTLTPVSESLSGASVRNVRAEEEEEQESASSEL------QTLENSITMG- 205

  Fly   172 PREQVERAMAASYN---NPERAVEYLINGIPAEEGTFYNRLNESTNPSLIPSGPQPASAT--SAE 231
             :.::.:|...:.|   .|::..:..|..                     |.||:|.|.:  ||.
Zfish   206 -KMKLLKAKMENMNLNKKPKKTAKLKIRP---------------------PVGPRPCSGSHGSAR 248

  Fly   232 RSTESNSDPFEFLRSQPQFLQMRSLIYQNPHLLHAVLQQIGQTNPALLQLISENQDAFLNMLNQP 296
            .                             |.:..||.|||..:...|..|.:.|        ||
Zfish   249 H-----------------------------HRMFRVLPQIGHASSTHLPPIGDQQ--------QP 276

  Fly   297 IDRESESGATVPPVSNARIPSTLDNVDLFSPDLEVATSAQRSAAGTSAAHQSGSAA--------- 352
            :       .:.|...:|..|.|    .|.||            |.:|.||.|.:|:         
Zfish   277 V-------LSTPTAGSAHQPYT----SLSSP------------ASSSRAHPSSAASGIYMLQAEE 318

  Fly   353 --DNE--------------DLEQP----------------------LGVSTIRLNRQDK-DAIER 378
              ||.              |:..|                      :.:....|...:| ..||.
Zfish   319 PWDNPVPRKIRLPPKVSRLDMRGPKVMRDCVYPPLSLLSSPGVQDEVDIKNEHLTLTEKTTVIES 383

  Fly   379 LKALGF--PEALVLQAYFACEKN-------EEQAANFLLSSS 411
            .||:.|  ||.|.|......|::       |..||..|||.:
Zfish   384 PKAVPFNLPEPLSLDVSAQRERSLNSLTMPEANAAAPLLSQA 425

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rad23NP_651918.2 rad23 1..413 CDD:273167 97/497 (20%)
zfand4NP_001189400.1 Ubl_ZFAND4 28..101 CDD:340500 19/74 (26%)
ZnF_AN1 613..651 CDD:197545
Blue background indicates that the domain is not in the aligned region.

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