DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt7 and Syt4

DIOPT Version :9

Sequence 1:NP_726557.3 Gene:Syt7 / 43783 FlyBaseID:FBgn0039900 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_113881.1 Gene:Syt4 / 64440 RGDID:68397 Length:425 Species:Rattus norvegicus


Alignment Length:429 Identity:145/429 - (33%)
Similarity:227/429 - (52%) Gaps:44/429 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 LIACLAILGLIITIALFLAGGYLWW---------RHKRSQLQFIEPNE-----DEESSSYSLRAA 56
            ::...:..||:.|::||.      |         .:|....:|:...:     .|..||......
  Rat    17 VVGIFSAFGLVFTVSLFA------WICCQRRSAKSNKTPPYKFVHVLKGVDIYPENLSSKKKFGG 75

  Fly    57 QDIVDSGNPPTKPQVPVAHAITTPLQNNINRKLNGFLSLRTPLIGGSG-ASQTKPQIISSVGNPG 120
            .|..::......|.:    ::...|:   .|.|||......|..|.|. .....|::......  
  Rat    76 DDKSEAKRKAALPNL----SLHLDLE---KRDLNGNFPKTNPKAGSSSDLENVTPKLFPETEK-- 131

  Fly   121 DGTTKDSANKSISMTDMYLDSTDPSENVGQIHFSLEYDFQNTTLILKVLQGKELPAKD-LSGTSD 184
            :..:.:|...|.|:|     |.:..|.:|.:..||||:|:....::.:.:.:.|||.| .|.|||
  Rat   132 EAVSPESLKSSTSLT-----SEEKQEKLGTLFLSLEYNFEKKAFVVNIKEAQGLPAMDEQSMTSD 191

  Fly   185 PYVRVTLLPDKKHRLETKIKRRTLNPRWNETFYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGE 249
            ||:::|:||:|||:::|::.|:||:|.::|||.|.|.|...:|...||..|..:|||||||.|||
  Rat   192 PYIKMTILPEKKHKVKTRVLRKTLDPVFDETFTFYGVPYPHIQELSLHFTVLSFDRFSRDDVIGE 256

  Fly   250 VFLPLCQVDFA-GKQSFWK-ALKPPAKDKC--GELLSSLCYHPSNSILTLTLIKARNLKAKDING 310
            |.:||..::.: ||....: .:|..||...  ||||.||||..:.:.||:.::|||:|...|::|
  Rat   257 VLVPLSGIELSDGKMLMTREIIKRNAKKSSGRGELLVSLCYQSTTNTLTVVVLKARHLPKSDVSG 321

  Fly   311 KSDPYVKVWLQFGDKRVEKRKTPIFTCTLNPVFNESFSFNVPWEKIRECSLDVMVMDFDNIGRNE 375
            .|||||||.|....||:.|:||.:..||.|.||||.|.|::|.|.:.|.|::.:|:|.:...|||
  Rat   322 LSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDSERGSRNE 386

  Fly   376 LIGRILL-AGKNGSGASETKHWQDMISKPRQTVVQWHRL 413
            :|||::| |...|||..   ||:::...||:.:.:||.|
  Rat   387 VIGRLVLGATAEGSGGG---HWKEICDFPRRQIAKWHML 422

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt7NP_726557.3 C2A_Synaptotagmin-7 147..271 CDD:176032 52/126 (41%)
C2B_Synaptotagmin-7 277..414 CDD:176050 62/140 (44%)
Syt4NP_113881.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 102..121 5/18 (28%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 126..147 4/27 (15%)
C2A_Synaptotagmin-4-11 153..279 CDD:176034 52/125 (42%)
C2B_Synaptotagmin-4 288..423 CDD:176049 62/138 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D925064at2759
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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