DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt7 and Syt6

DIOPT Version :9

Sequence 1:NP_726557.3 Gene:Syt7 / 43783 FlyBaseID:FBgn0039900 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_038958947.1 Gene:Syt6 / 60565 RGDID:62012 Length:535 Species:Rattus norvegicus


Alignment Length:393 Identity:148/393 - (37%)
Similarity:218/393 - (55%) Gaps:60/393 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 RHKRSQLQFIEPNEDEESSSYSLRAAQDI----VDSGN--PPTKPQVPVAHAITTPLQNNINRKL 89
            ||.:.|.|..||......:|:.....:.:    ||.||  ||...:.|.:               
  Rat   161 RHTKLQRQTTEPASSTRHTSFKRHLPRQMHVSSVDYGNELPPAAAEQPTS--------------- 210

  Fly    90 NGFLSLRTPLIGGSGASQTKPQIISSVGNPGDGTTKDSANKSISMTDMYLDSTDPSENVGQIHFS 154
                      ||     :.||::.......||....::|                 ::.|:|:||
  Rat   211 ----------IG-----RIKPELYKQKSVDGDEAKSEAA-----------------KSCGKINFS 243

  Fly   155 LEYDFQNTTLILKVLQGKELPAKDLSGTSDPYVRVTLLPDKKHRLETKIKRRTLNPRWNETFYFE 219
            |.||:::.|||:::|:..:|||||..|:|||||::.||||:|.:|:|::.|:||||.::|.|:|.
  Rat   244 LRYDYESETLIVRILKAFDLPAKDFCGSSDPYVKIYLLPDRKCKLQTRVHRKTLNPTFDENFHFP 308

  Fly   220 GFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLP-LCQV-DFAGKQSFWKALKPPAKDK--CGEL 280
             .|.::|..|.|||.|||:|||||.|.||||.|. |.:. |.:.:.|.||.::....:.  .||:
  Rat   309 -VPYEELADRKLHLSVFDFDRFSRHDMIGEVILDNLFEASDLSRETSIWKDIQYATSESVDLGEI 372

  Fly   281 LSSLCYHPSNSILTLTLIKARNLKAKDINGKSDPYVKVWLQFGDKRVEKRKTPIFTCTLNPVFNE 345
            :.||||.|:...||||:||.|||||.||.|.|||||||.|....:|::|:||.|...|||||:||
  Rat   373 MFSLCYLPTAGRLTLTVIKCRNLKAMDITGYSDPYVKVSLLCDGRRLKKKKTTIKKNTLNPVYNE 437

  Fly   346 SFSFNVPWEKIRECSLDVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMISKPRQTVVQW 410
            :..|::|.|.:.:.||.:.|||:|.:|.||:|| :...|.:..|... .||.:|::.||:.:..|
  Rat   438 AIIFDIPPENMDQVSLLISVMDYDRVGHNEIIG-VCRVGISAEGLGR-DHWNEMLAYPRKPIAHW 500

  Fly   411 HRL 413
            |.|
  Rat   501 HCL 503

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt7NP_726557.3 C2A_Synaptotagmin-7 147..271 CDD:176032 62/125 (50%)
C2B_Synaptotagmin-7 277..414 CDD:176050 65/137 (47%)
Syt6XP_038958947.1 C2A_Synaptotagmin-1-5-6-9-10 237..361 CDD:176031 62/124 (50%)
C2B_Synaptotagmin-3-5-6-9-10 370..503 CDD:176048 64/134 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.920

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