DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt7 and Syt3

DIOPT Version :9

Sequence 1:NP_726557.3 Gene:Syt7 / 43783 FlyBaseID:FBgn0039900 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001107588.1 Gene:Syt3 / 20981 MGIID:99665 Length:587 Species:Mus musculus


Alignment Length:536 Identity:162/536 - (30%)
Similarity:240/536 - (44%) Gaps:144/536 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MASIVLIAC-LAILGLIITIALFLAGGYLW--WRHK----------RSQL--------------- 37
            :.|:::..| :.:||    ::||::....|  ||.|          |..|               
Mouse    56 LLSVIVTFCGIVLLG----VSLFVSWKLCWVPWRDKGGSAVGGGPLRKDLAPGVGLAGLVGGGGH 116

  Fly    38 ----------------------------QFIEP-----NEDEESS-----SYSLRAAQDIVDSGN 64
                                        :.:||     :|..|.|     ||...|...:|.:|.
Mouse   117 HLGASLGGHPLLGGPHHHGHTAHHPPFAELLEPGGLGGSEPPEPSYLDMDSYPEAAVASVVAAGV 181

  Fly    65 PP--TKPQVP----------------------VAH-------------AITTPL-QNNINRKLNG 91
            .|  |.|::|                      .:|             |:..|| |..:..:.:.
Mouse   182 KPSQTSPELPSEGGTGSGLLLLPPSGGGLPSAQSHQQVTSLAPTTRYPALPRPLTQQTLTTQADP 246

  Fly    92 FL-----SLRTPLIGGSGAS----QTKPQIISSV---GNPGDGTTKDSANKSISMTDMYLDSTDP 144
            ..     :|..||.||...:    |.||::....   |..|.|                  |.:.
Mouse   247 STEERPPALPLPLPGGEEKAKLIGQIKPELYQGTGPGGRRGGG------------------SGEA 293

  Fly   145 SENVGQIHFSLEYDFQNTTLILKVLQGKELPAKDLSGTSDPYVRVTLLPDKKHRLETKIKRRTLN 209
            ....|:|.|:|.|.:.:..|::::||..:|||||.:|.|||||::.||||:|.:.:||:.|:|||
Mouse   294 GAPCGRISFALRYLYGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLN 358

  Fly   210 PRWNETFYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLP--LCQVDFAGKQSFWKALKPP 272
            |.:||||.| ..|:.:|..|.||..|:|:|||||.|.||:|.|.  |...:....:..|:.:...
Mouse   359 PIFNETFQF-SVPLAELAQRKLHFSVYDFDRFSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEG 422

  Fly   273 AKDKC--GELLSSLCYHPSNSILTLTLIKARNLKAKDINGKSDPYVKVWLQFGDKRVEKRKTPIF 335
            ..:|.  |||..||||.|:...||:|:|||.||||.|:.|.||||||..|....:|::||||.|.
Mouse   423 GSEKADLGELNFSLCYLPTAGRLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIK 487

  Fly   336 TCTLNPVFNESFSFNVPWEKIRECSLDVMVMDFDNIGRNELIGRILLAGKNGSGASETKHWQDMI 400
            ..||||.:||:..|:|..|.:....|.:.|:|:|.||.||:|| :...|...:.....:||.:|:
Mouse   488 KNTLNPTYNEALVFDVAPESVENVGLSIAVVDYDCIGHNEVIG-VCRVGPEAADPHGREHWAEML 551

  Fly   401 SKPRQTVVQWHRLKPE 416
            :.||:.|..||:|..|
Mouse   552 ANPRKPVEHWHQLVEE 567

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt7NP_726557.3 C2A_Synaptotagmin-7 147..271 CDD:176032 55/125 (44%)
C2B_Synaptotagmin-7 277..414 CDD:176050 61/138 (44%)
Syt3NP_001107588.1 Cysteine motif. /evidence=ECO:0000269|PubMed:10531343 10..34
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 183..258 10/74 (14%)
C2A_Synaptotagmin-1-5-6-9-10 297..421 CDD:176031 55/124 (44%)
C2B_Synaptotagmin-3-5-6-9-10 430..564 CDD:176048 61/134 (46%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D394604at33208
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.920

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