DRSC/TRiP Functional Genomics Resources

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Protein Alignment Syt7 and rbf-1

DIOPT Version :9

Sequence 1:NP_726557.3 Gene:Syt7 / 43783 FlyBaseID:FBgn0039900 Length:416 Species:Drosophila melanogaster
Sequence 2:NP_001367825.1 Gene:rbf-1 / 175943 WormBaseID:WBGene00004316 Length:1123 Species:Caenorhabditis elegans


Alignment Length:400 Identity:111/400 - (27%)
Similarity:174/400 - (43%) Gaps:61/400 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 LRAAQDIVDSGNPPTKPQVPVAHAITTPLQNNINRKLNGF-----LSLRTPL--IGGSGA--SQT 108
            |.|:...:.|.:..||.:               ||:.:|.     |.|||.|  :....|  |:.
 Worm   744 LAASSSFLSSPDDDTKQK---------------NRRRDGVGRVNSLQLRTSLDDVAPPVAPISKM 793

  Fly   109 KPQIISSVGNPGDGTTKDSANKSI---------------SMTDMYLDSTDPSENVGQIHFSLEYD 158
            ...|:||  .|...||.:..:.|:               ::|.....:::|. ::|.|..:|.|.
 Worm   794 NGHIVSS--EPTSSTTSNQNHTSVPIPTVPVVPEEEEEKAITASTESASEPG-SLGSITLTLTYH 855

  Fly   159 FQNTTLILKVLQGKELPAKDLSGTSDPYVRVTLLP--DKKHRLETKIKRRTLNPRWNETFYFEGF 221
            ..:..|.:.:::.|.|.|.|.:|.|||||:..|||  .|..:|.:|...:||||.|||...:.|.
 Worm   856 SADKKLKMHLIRAKNLKAMDSNGFSDPYVKFHLLPGNTKATKLTSKTIEKTLNPEWNEEMSYYGI 920

  Fly   222 PIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQVDFAGKQSF----WKALKPPAKDK------ 276
            .....:.::|.:.|.|.||.. .|.:||..:.|.:::....:.|    ..||..|.:.|      
 Worm   921 TEDDKEKKILRVTVLDRDRIG-SDFLGETRIALKKLNDNEMKKFNLYLESALPVPQQTKEEENED 984

  Fly   277 CGELLSSLCYHPSNSILTLTLIKARNLKAKDINGKSDPYVKVWLQFGDKRVEKRKTPIFTCTLNP 341
            .|::...|.|:.....|.:.:.:...|...|..|.||||.||.|.....:..:.||.....||||
 Worm   985 RGKINVGLQYNIQQGSLFININRCVELVGMDSTGFSDPYCKVSLTPITSKAHRAKTSTKKRTLNP 1049

  Fly   342 VFNESFSFNVPWEKIRECSLDVMVMDFDNIGRNELIGRILL--AGKNGSGASETKHWQDMISKPR 404
            .:||...|.||::.:.:.:|.:.|.|.|....::.||.|||  :.|:..|    :.|...|..|.
 Worm  1050 EWNEQLQFVVPFKDLPKKTLQIGVYDHDLGKHDDYIGGILLSTSAKDERG----RQWIKCIENPG 1110

  Fly   405 QTVVQWHRLK 414
            ..|..||||:
 Worm  1111 TLVEAWHRLE 1120

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt7NP_726557.3 C2A_Synaptotagmin-7 147..271 CDD:176032 41/129 (32%)
C2B_Synaptotagmin-7 277..414 CDD:176050 43/138 (31%)
rbf-1NP_001367825.1 FYVE_2 220..342 CDD:396754
C2A_Rabphilin_Doc2 845..967 CDD:176000 39/122 (32%)
C2B_Rabphilin_Doc2 987..1119 CDD:176030 41/135 (30%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000025
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X85
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.910

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