DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Syt7 and tc2n

DIOPT Version :9

Sequence 1:NP_726557.3 Gene:Syt7 / 43783 FlyBaseID:FBgn0039900 Length:416 Species:Drosophila melanogaster
Sequence 2:XP_009305708.1 Gene:tc2n / 101885722 -ID:- Length:465 Species:Danio rerio


Alignment Length:365 Identity:79/365 - (21%)
Similarity:146/365 - (40%) Gaps:66/365 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 SLRTPLI-------GGSGASQTKPQIIS----SVGNP---------------GDGTTKDSANKSI 132
            |||.|.:       .|:|...:..|.:.    .:.||               ...:.:||...|.
Zfish   119 SLRRPTLKNRVNYNPGTGLDHSDAQRLCLSMFDLSNPQGRVERYDSVSSIQSSTSSVQDSFGSSR 183

  Fly   133 SMTDMYLDSTDPSENVGQIHFSLEYDFQNTTLILKVLQGKELPAKDLSGTSDPY------VRVTL 191
            |:..:.|...:.....|::...|:|:.....:.:.:::     ..|||..::..      |:..:
Zfish   184 SLESITLSGDERDREPGKVCVHLKYEAAVEQVWITLVK-----CTDLSVYNERVEQQKIGVKGVI 243

  Fly   192 LPDKKHRLETKIKRRTLNPRWNETFYFEGFPIQKLQSRVLHLHVFDYDRFSRDDSIGEVFLPLCQ 256
            ..:|..|.::.:|..:.:..:.|||.|. ..:::::...|.|.:..:.  .|..::||..|.|..
Zfish   244 TVNKPVRFKSTLKEASEDTVFMETFVFT-LNLEQIRRSALVLRLQAHT--PRKRTLGECVLSLRS 305

  Fly   257 VDFAGKQ--SFWKALKPPAKDK-C-GELLSSLCYHPSNSILTLTLIKARNLKAKDINGKSDPYVK 317
            :   |.|  ..|...|.|:|.. | .||..:||:.|.||.:.|.::..:||.:.........:||
Zfish   306 L---GPQETKHWLEFKHPSKTHVCHAELQLALCFQPVNSRMQLQILSTQNLPSSSSPLTQSYFVK 367

  Fly   318 VWLQFGDKRVEKRKTPIFTCTLNPVFNESFSFNVPWEKI---------RECSLDVMVMDFDNIGR 373
            |.|....|.:.||||...         :|....|.|.::         ....|.|.:....::.|
Zfish   368 VDLLGEGKFLLKRKTKAV---------KSSGGQVQWGEVLHFPITSQDHNLQLSVKLYSRSSVRR 423

  Fly   374 NELIGRILLAGKNGSGASETKHWQDMISKPRQTVVQWHRL 413
            ..|:|::||: .:.|.....:.|:|.::.|.:.|..|||:
Zfish   424 KHLLGQVLLS-LDSSSPEAVEQWKDAMANPEKVVTSWHRV 462

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Syt7NP_726557.3 C2A_Synaptotagmin-7 147..271 CDD:176032 24/131 (18%)
C2B_Synaptotagmin-7 277..414 CDD:176050 38/147 (26%)
tc2nXP_009305708.1 C2 215..317 CDD:301316 21/112 (19%)
C2B_Tac2-N 328..462 CDD:176074 36/143 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.