DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment NfI and NFIX

DIOPT Version :9

Sequence 1:NP_995592.2 Gene:NfI / 43782 FlyBaseID:FBgn0042696 Length:766 Species:Drosophila melanogaster
Sequence 2:XP_005259974.1 Gene:NFIX / 4784 HGNCID:7788 Length:520 Species:Homo sapiens


Alignment Length:578 Identity:224/578 - (38%)
Similarity:281/578 - (48%) Gaps:145/578 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 QDEFHPFIEALLPYVKSFSYSWFNLQAAKRKYYKKHEKRMSLEEERHCKDELQNEKTEVKQKWAS 91
            :||||||||||||:|::|||:||||||.||||:||||||||.:|||..||||..||.|:||||||
Human    68 RDEFHPFIEALLPHVRAFSYTWFNLQARKRKYFKKHEK
RMSKDEERAVKDELLGEKPEIKQKWAS 132

  Fly    92 RLLGKLRKDITQESREDFVQSIIGKRKSICVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFK 156
            |||.||||||..|.|||||.:|.||:...|||||||||||:||||||||||||||||||||||||
Human   133 RLLAKLRKDIRPEFREDFVLTITGKKPPCCVLSNPDQKGKIRRIDCLRQADKVWRLDLVMVILFK 197

  Fly   157 AIPLESTDGERLEKNPECLHPGLCVNPYHINVSVRELDLYLANFINTHNSINNTNTTFSTTPGVR 221
            .|||||||||||.|:|:|.:|||||.|:||.|:::|||||||.|::|..|               
Human   198 GIPLESTDGERLYKSPQCSNPGLCVQPHHIGVTIKELDLYLAYFVHTPES--------------- 247

  Fly   222 SPHITMYNRSNDPNRKDEVADMKNDVVKQNPYNGVVCNDIILATGVFSSQELWTLSKDLILDESN 286
                   .:|:..|::.: ||     :|..|...:...|..:.:||::..||..:|:..:...|.
Human   248 -------GQSDSSNQQGD-AD-----IKPLPNGHLSFQDCFVTSGVWNVTELVRVSQTPVATASG 299

  Fly   287 DINLNSSLIKRENVGATYECNTYQINSESSISAAQSLVQSGSIAANPIPLGYSIDFIDQRITQLS 351
            .   |.||...|:  .:|    |.||..:  ...:|:....|.:....|  .|||  |..:    
Human   300 P---NFSLADLES--PSY----YNINQVT--LGRRSITSPPSTSTTKRP--KSID--DSEM---- 345

  Fly   352 QSPLPRTEGPNGDSHDANKIDQSSSPPITSTASDNGTSSFSLIVRATDSSIEDPKTSPISLHRYT 416
            :||:.....|......|....|||..|   ...|.|:.      |||.|::..|.||.|.     
Human   346 ESPVDDVFYPGTGRSPAAGSSQSSGWP---NDVDAGSP------RATASALHFPSTSIIQ----- 396

  Fly   417 SLSSRTLAQALPQHSCSLLHSSSTSPTNTLYYPQHNNTRPSQTTSVEEQNRVGSDKYSTEPQDIS 481
                    |:.|..         |.|  |:.|..|:                |.|       .:.
Human   397 --------QSSPYF---------THP--TIRYHHHH----------------GQD-------SLK 419

  Fly   482 DFVTYVCQDTSHTTTITGSAENHSFQHSHTLPQGHGHSPHFQIHQQLRSAKLTTSPSTHYHSTML 546
            :||.:||.|.|...|   ...|.|         |.|..|                     .|.:|
Human   420 EFVQFVCSDGSGQAT---GQPNGS---------GQGKVP---------------------GSFLL 451

  Fly   547 PPMLPPMARPVAIIRSSSDLTLVQSPPTSLPLTAQSTSLNDNSCIAKHSLPTDNRLAS 604
            ||. ||:||||.:....|..|  .:.|....||..|.|      .|.....:.||..|
Human   452 PPP-PPVARPVPLPMPDSKST--STAPDGAALTPPSPS------FATTGASSANRFVS 500

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
NfINP_995592.2 NfI_DNAbd_pre-N 25..64 CDD:287494 29/36 (81%)
MH1 85..193 CDD:260161 82/107 (77%)
NFIXXP_005259974.1 NfI_DNAbd_pre-N 66..105 CDD:287494 29/36 (81%)
MH1 127..229 CDD:260161 81/101 (80%)
CTF_NFI 272..520 CDD:279231 82/346 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165159999
Domainoid 1 1.000 170 1.000 Domainoid score I3771
eggNOG 1 0.900 - - E1_KOG3663
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 297 1.000 Inparanoid score I2732
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D411112at33208
OrthoFinder 1 1.000 - - FOG0000997
OrthoInspector 1 1.000 - - otm41885
orthoMCL 1 0.900 - - OOG6_106071
Panther 1 1.100 - - O PTHR11492
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X590
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
User_Submission 00.000 Not matched by this tool.
1312.760

Return to query results.
Submit another query.