DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and LRG1

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_010041.2 Gene:LRG1 / 851358 SGDID:S000002399 Length:1017 Species:Saccharomyces cerevisiae


Alignment Length:1004 Identity:221/1004 - (22%)
Similarity:359/1004 - (35%) Gaps:344/1004 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   314 GKELSRGNTDSNRSNKLLHDNFFCLMKCDTKPIIPSPKTEF-----FLDLNKVPQNFELKNKLNS 373
            |:|:...:.:....:|..|.|    :..:|..:...||.|:     ..|:|  |..:||..::.:
Yeast   174 GEEIHCWHPECYGIHKYWHVN----LAAETVGLQYLPKLEYNPNSGDKDIN--PTAYELDKQMQA 232

  Fly   374 NGQSVERIQKTCGTQTNFIQLSELKTLAEQYNLMVTNC----------DNTLKLLEEPS----KQ 424
                           .||| ||:..::..::.....:|          ::.||.:|...    |.
Yeast   233 ---------------FNFI-LSKTWSVLYRFEEEAASCISDMFQYLTSNDQLKGIESTGLLVLKI 281

  Fly   425 DCSKSSHLIFRRSSLDEDISQSVSDTIKRYLNMARKKSMQ-DSD-----SNRFKSINYDKNLRNI 483
            ||      :||  .||.             ||::..|||. :||     :|...:..|.|..:|:
Yeast   282 DC------LFR--GLDT-------------LNLSTNKSMPVNSDQECIENNAMAASKYSKFPKNL 325

  Fly   484 KAK-----------GVLNP---------PGISAGLHKAVQTLNAWPL-IALDFIRGNESSLNLKN 527
            ..|           |..|.         ..:..||...::.|..:.| .||:    |....:..|
Yeast   326 STKIMIYLQLLRKLGTENKNETITISSFMSVITGLAHFLKLLTRFGLYTALE----NNKLTHSVN 386

  Fly   528 AHLEWLRLEDERSHMQLERDKNPIELRSKVNPLQ-IASPAN-TSSYSKCTSAPTSPTSHSKLEKA 590
            ..|.:||          |.:||.:   .:.||.| |.:|.| |.|.:.|             .|.
Yeast   387 PLLRFLR----------EVEKNEL---FENNPFQYIKTPVNATDSCAGC-------------NKY 425

  Fly   591 IRTSSGLLSSSSQFISNILH--------GHNNAGNQFNTLTDKLPDCNQ-------SHATAS--- 637
            |:      ....||..:..|        .|.|...:  :|||  |..|:       ||.:..   
Yeast   426 IQ------EECIQFYEHRWHIACFTCSSCHKNINPR--SLTD--PTFNKEKKKILCSHCSIDDPA 480

  Fly   638 ----------------------------MQKSKSLSNVGQ------------FV-----AKRMWR 657
                                        |.|||:.:.||:            ::     .||: |
Yeast   481 SVPGFKFVTKLAQLIFLLKIALVKSRTVMLKSKASNKVGRNSLQSTMLKEQTYIRTLNDIKRL-R 544

  Fly   658 SRSKS----QNKRSYLKSSI----------PTLKWYPSEHFLWISESGESFQIVETNLTRLSKIE 708
            ||.:|    .||:...||.|          || |...|::.:..::...|.|.|.|.....|..:
Yeast   545 SRRESVRVTHNKQQARKSVILETAETDLNDPT-KQGDSKNLVIQTDDPSSSQQVSTRENVFSNTK 608

  Fly   709 S----DIVKNFALEKIQELN---IGNIEDLK-ISPQKRRCVPKKKSLTTSFFDNGKKDDQNPRSV 765
            :    ||.:..|.|:.:||.   ..:.:.|| ...:....||||..:..|.....:      .|:
Yeast   609 TLTLDDISRIVAAEQARELRPNAFAHFKKLKETDDETSNVVPKKSGVYYSELSTME------LSM 667

  Fly   766 LFGTSLECCLERDSKRNVTMEDRSKYSLLSM-FRGSGSTPGSVLKLNDNVRSCESLPSKSLEYGS 829
            :...||....   .|:.::..|.:..||:|| |.......||.......:.|.|  |.|      
Yeast   668 IRAISLSLLA---GKQLISKTDPNYTSLVSMVFSNEKQVTGSFWNRMKIMMSME--PKK------ 721

  Fly   830 TELSAYVRGSFSNISKPLASLSQSENEDTELNF--VKAYQEHSQLMVPIFVNNCIDYLEDNGLQQ 892
             .::..|.|:      ||..|.:....|::|..  ||       :.:||.::..|..|....:..
Yeast   722 -PITKTVFGA------PLDVLCEKWGVDSDLGVGPVK-------IRIPIIIDELISSLRQMDMSV 772

  Fly   893 VGLFRVSTSKKRVKQLREEFDKDIYFGISVDTCPHD-----------VATLLKEFLRDLPEPLLC 946
            .|:||.:.:.:|:::|.          .::|:.|.:           ::.|||:|:|:||:|:|.
Yeast   773 EGIFRKNGNIRRLRELT----------ANIDSNPTEAPDFSKENAIQLSALLKKFIRELPQPILS 827

  Fly   947 NTLYLTFLKTQRIRNRRLQLEAISHLIRLLPIPHRDTLYVLLVFLAKVAAHSDDIWSTEGCCL-- 1009
            ..||..::|..:|.....:...|..:..|||..:|:.|..||.||     |    |::....:  
Yeast   828 TDLYELWIKAAKIDLEDEKQRVILLIYSLLPTYNRNLLEALLSFL-----H----WTSSFSYIEN 883

  Fly  1010 TLGNKMDSYNLATVFAPNILRSTHLTFSRD----------------KEQENMIDAINVVRTMINH 1058
            .:|:|||.:||:||..||||...|...|.|                .:.||...||.:|..:|.|
Yeast   884 EMGSKMDIHNLSTVITPNILYLRHKEISNDNVPDEPESGLVDSFAQNKGENYFLAIEIVDYLITH 948

  Fly  1059 YEEIFNISAELLNVIYTQALEACPEKLYELISTKVYGTEWTQQQIDDPQPGSLSDVLLEPPIHGK 1123
            .||:..:...|:|::....|                      |::|:                  
Yeast   949 NEEMAMVPKFLMNLLKDVQL----------------------QKLDN------------------ 973

  Fly  1124 RYENINDFNNINFKRCQDKRRDHSDPDKK 1152
             ||:||.|.:...   |.|..|:|:.|.|
Yeast   974 -YESINHFISTVM---QSKTIDYSECDIK 998

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 60/223 (27%)
LRG1NP_010041.2 LIM1_Lrg1p_like 28..90 CDD:188777
LIM 98..149 CDD:259829
LIM3_Lrg1p_like 419..475 CDD:188779 15/78 (19%)
RhoGAP_fLRG1 728..959 CDD:239862 68/262 (26%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG2710
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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