DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and arhgap36

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:XP_009301716.1 Gene:arhgap36 / 559813 ZFINID:ZDB-GENE-060616-298 Length:675 Species:Danio rerio


Alignment Length:647 Identity:170/647 - (26%)
Similarity:272/647 - (42%) Gaps:171/647 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   678 WYPSEHFLWISESGESFQIVETNLTRLSKIESDIVKNFALEKIQELNIGNIEDLKIS-PQKRRCV 741
            :|..:| .|.:..|:|.::....:..||::|...::..||..::..::    |.||| |::.|  
Zfish    29 YYVGDH-TWATMLGQSVRLQPVAIQSLSELERARLQEVALYHLERRDL----DFKISIPREIR-- 86

  Fly   742 PKKKSLTTSF--FDNGKKDDQN-PRSVLFGTSLECCLERD----SKRNVTMEDRS-----KYSLL 794
            .::|||...|  |...|||.:: |::  |...|...:..|    .:::...|.|.     :.|:|
Zfish    87 KRRKSLRRKFDSFSKEKKDRESAPKA--FSIPLSQVIANDLAYKQRQDALKESRRDCLDLEASVL 149

  Fly   795 SMFR-------------------GSGSTPGSVLKLNDNVRSCESLPSKSLEYGSTELSAYVRGSF 840
            . ||                   |:.|:|  ||:|:       |.|..|....:|. ..:.||..
Zfish   150 H-FRAEKWQQNGNRPLGKTVLSPGAASSP--VLELH-------SKPPSSAFMDNTS-RTHRRGGM 203

  Fly   841 S--NISKPLASLSQ-----SENEDTELNFVKA-------------YQEHSQLMVPIFVNNCIDYL 885
            |  :||..:.|.|:     ..:...||...||             |::     ||..|..|.:::
Zfish   204 SVDSISDMVESQSRLLEALQLSHPNELEMKKAAGRTQAKLSLNPIYRQ-----VPRVVERCCNHI 263

  Fly   886 EDNGLQQVGLFRVSTSKKRVKQLREEFDKDIYFGISVDTCPHDVATLLKEFLRDLPEPLLCNTLY 950
            :..|||.:|:|||.:|||||:||||:||..|...:..:...||||.||||||||:|:|||...||
Zfish   264 QTYGLQTLGIFRVGSSKKRVRQLREDFDNGIDVVLDEEHSVHDVAALLKEFLRDMPDPLLPRELY 328

  Fly   951 LTFLKTQRIRNRRLQLEAISHLIRLLPIPHRDTLYVLLVFLAKVAAHSDDIWSTEGCCLTLGNKM 1015
            ..||....:|... ||..:..|:.|||..:.|||..||..|..|..:::.........:: ||||
Zfish   329 RAFLHANLLRGAD-QLSYLQQLLYLLPPCNCDTLLRLLTLLHTVQENANSSTGPNKQEIS-GNKM 391

  Fly  1016 DSYNLATVFAPNILRSTHLTFSRDKEQ---------ENMIDAINVVRTMINHYEEIFNISAELLN 1071
            .:.|||.:|.||:|:.     .|..|:         |:....|:|...:|.:::.:|.:||||..
Zfish   392 TAANLAVIFGPNLLQK-----ERGSERELSPQALGIEDSTAVISVTLMLIQNHQHLFMVSAELQQ 451

  Fly  1072 VIYTQALEACPEKLYELISTKVYGTEWTQQQIDDPQPGSLSDVLLEPPIHGKRYENINDFNNINF 1136
            .:....::..|:.:..|:..|:                |.|.:.:||...|              
Zfish   452 EVLMSLIQTDPDVIDYLLRRKL----------------SSSSLTVEPDSGG-------------- 486

  Fly  1137 KRCQDKRRDHSDPDKKKNNNENLEIITASLKISVAEQS-HISLKEPIKEQEPITSYKQFSRSTLP 1200
                  |||                 |.|...|:.:.| .:|.:||:....|       ..|.:.
Zfish   487 ------RRD-----------------TQSSLDSMGQSSDDLSSREPLCPLYP-------EHSAIG 521

  Fly  1201 TSISDVGVNTLRTDGAKLENKMKILTSNINKQDIPIKTTYK-RQ-----NLISSSRRISQEP 1256
            :..|:|.:|.|..:           |:.....::|.|:..| ||     ||:|.::..|..|
Zfish   522 SLSSEVLLNVLHLN-----------TNRKRSSEVPPKSIVKMRQFHSHHNLLSLTQSSSNAP 572

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 77/203 (38%)
arhgap36XP_009301716.1 RhoGAP_ARHGAP6 244..449 CDD:239841 78/216 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170580439
Domainoid 1 1.000 122 1.000 Domainoid score I5601
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006356
OrthoInspector 1 1.000 - - otm24611
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR12635
Phylome 00.000 Not matched by this tool.
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3427
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.060

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