DRSC/TRiP Functional Genomics Resources

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Protein Alignment RhoGAP102A and cv-c

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_001097786.1 Gene:cv-c / 41749 FlyBaseID:FBgn0285955 Length:2351 Species:Drosophila melanogaster


Alignment Length:1367 Identity:275/1367 - (20%)
Similarity:474/1367 - (34%) Gaps:381/1367 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 EESVNCLRSPMAAVKKRSGPLDIALDEA--------NDVSKIWS---LPLGNASSMRKPMIFASE 61
            ||:...|.|..:.:...|..||...:|:        .|:|..|.   |...:....|| ...:::
  Fly  1077 EEATGVLSSGKSGISLDSSGLDNDNNESGIGTATPPKDMSHYWKSHHLQHHHHHHHRK-CTGSAQ 1140

  Fly    62 HSEGVASPNKVRRRSTKDKEKKRERWLLTRKTWRYMTDAGRKLIPDGYQTGSGNH------DLIE 120
            .:|.|:|...:|:             :..:|:....:.....::....|.|||..      |:::
  Fly  1141 DNESVSSLEALRK-------------MKFQKSGSVASSDDPDVLEVLSQCGSGGEANESQDDMLD 1192

  Fly   121 DQFQRVCLSEPSFILWSRRTSYPGAFSCSKR---RLKPLLRHASASRRKQT------VDATKDYH 176
            ::..::..|:....:|....:...|.|.|..   ...|::     .|||.|      |..|:..|
  Fly  1193 EEKDKMSKSQDYDEIWDCDCTDGDASSASGGGGVTATPVI-----LRRKYTAPPPILVPRTQRSH 1252

  Fly   177 IAD------------RVIELLQTYLKLRDAYKTTTLLGTKTVRPDQT-SSPSAQRPNFKNNGDNH 228
            ..|            :|:.:....||.::..:.:.:|..:   |.|: .||||...|        
  Fly  1253 SLDHYHSPQPLVHPRKVLPIHHHALKSKERGQLSLVLRQE---PFQSLLSPSATAAN-------- 1306

  Fly   229 QVISSGTSIQTELLSLLKLLSNCPLFTHEGIQ---------LKFGDAPLSILEDKVLLKKIYSAL 284
                       :|...::|.|......|.|:.         .|...||: :|:::.:.:: :...
  Fly  1307 -----------QLHHFVELPSPSSASLHSGLGDSGGIQELCTKSNSAPM-LLKEREMSRR-FDNF 1358

  Fly   285 KKQQLHRTLH----SKDPYQANFSTSLSCLIKNGKELSRGNTDSNRSNKLLHDNFFCLMKCDTKP 345
            :.|  |.||.    ..|.|.|......:|     |.|......  :..::..|:           
  Fly  1359 EAQ--HLTLRYSRSQSDRYLAEIEAVEAC-----KWLRAAGFP--QYAQMYEDH----------- 1403

  Fly   346 IIPSPKTEFFLDLNKVPQNFELKNKLNSNGQSVER---IQKTCGTQTNFIQLSELKTLAEQYNLM 407
                   :|.:|||.|.::.  .|..|...||:.|   :...|.|.                .|.
  Fly  1404 -------QFPIDLNNVAKDH--TNLENDQLQSLYRRLCVLNRCATM----------------RLD 1443

  Fly   408 VTNCDNTLKLLEEPSKQDCSKSSHLIF----RRSSLDEDISQSVSDTIKRYLNMAR-KKSMQDSD 467
            .::...|.:..||...::.:.|.|..|    ||.|...::...:.......||:.: :.|.::|.
  Fly  1444 QSHKPQTPQQKEESDDENFALSEHWTFQPHIRRWSRIGEMGLELPPPGLLSLNVEKTESSSKESS 1508

  Fly   468 SNRFKSINYDKNLRN---IKAKGVLNPPGISAGLHKAVQTLNAWPLIALDFIRGNESSLNLKNAH 529
            .:||:.......|..   .||.|:.| .|.|.|                   .|::|. .|:.:.
  Fly  1509 PDRFEEDGAGITLVTPGCSKAGGIPN-DGSSLG-------------------EGSDSG-RLRRSG 1552

  Fly   530 LEWLRLEDERSHM--QLERDKNPIELRSKVNPLQIASP--------ANTSSYSK---CTSAPTSP 581
            .|  |::|:...:  ::|..|:....|.....:.|:.|        ...||..|   ..|.|.||
  Fly  1553 SE--RIKDQAKALLRRVESIKSRRRKRQNRENVVISGPTVLDLSQFGQRSSLRKPDAVYSTPPSP 1615

  Fly   582 TSHSKLEKAIRTSSGLLSSSSQFISNILHGHNNAGNQFNTLTDKLPDCNQSHATASMQKSKSLSN 646
            ::.|.:.         ....:.|..|.|...:::.|..:      |:.:....|.:..:|...|.
  Fly  1616 SALSPMH---------TFPKAPFFGNDLKVPSHSDNFLS------PNRSSPKRTPTTPRSMRTSP 1665

  Fly   647 VGQFVAKRMWRSRSKSQNKRSYLKSSIPTLKWYPSEHFLWISESGESFQIVETN-----LTRLSK 706
            :..|.:........||.:..||...|..             |.:|....:.:.:     |.|..|
  Fly  1666 LHFFSSPMSQLKEGKSDDSSSYYSDSQE-------------SSTGGKLSLRKPSKARRFLQRTGK 1717

  Fly   707 IE------------------SDIVKNFALEKIQELNIGNIEDLKISPQKRRCVPKKKSLTTSFF- 752
            ::                  .|...|....|:::|..|...:|...|:||      ....:|.| 
  Fly  1718 VDDIGAHSDSECHQGRKLLIKDANSNTTEVKVKKLTRGGSLNLGKDPKKR------DGFRSSSFR 1776

  Fly   753 --DNGKKDDQNPRSVLFGTSLECCLERDSKR-------NVTMEDRSKYSLLSMFRGSGSTPGSVL 808
              ...:|:.:|.......|:     ...|||       :..||:|               |..:.
  Fly  1777 SRSTSRKEAKNDEDTAGATT-----NGGSKRQPVVRWHSFQMEER---------------PNMIF 1821

  Fly   809 KLNDNVRSCESLPSKSL--EYGSTELSAYVRGSFSNISK-PLASL---------SQSENEDTEL- 860
                  |.|.|...:.|  :.|....:|...|....|.| .|.:|         |.....:.|| 
  Fly  1822 ------RKCFSKKIEPLQEDAGGMPFAAMSAGQLQIIRKLALVTLTGHMERYCPSHRSGWNWELP 1880

  Fly   861 NFVKAYQ------------------EHSQLMVPIFVNNCIDYLEDNGLQQVGLFRVSTSKKRVKQ 907
            .|:|..:                  :.|...:|:.|.....:|:.|.|.|||:||.|..|.|:.:
  Fly  1881 KFIKKIKMPDYKDKKVFGVPLLMILQRSGQTLPLAVRAAFRWLQLNALDQVGIFRKSGGKSRIMK 1945

  Fly   908 LREEFDKDIYFGISVDTC----PHDVATLLKEFLRDLPEPLLCNTLYLTFLKTQRIRNRRLQLEA 968
            |||:.:........:|..    .:|||.:||::.|:|||.||...:..||:...:.....::|:|
  Fly  1946 LREQIEVTDSTAECMDVFDLQQAYDVADMLKQYFRELPESLLTTKMSETFVAIFQHLPAEVRLDA 2010

  Fly   969 ISHLIRLLPIPHRDTLYVLLVFLAKVAAHSDDIWSTEGCCLTLGNKMDSYNLATVFAPNILRSTH 1033
            :...:.|||..:|:.|||||.||..|||:|..            |:|.|.||....|.:|..|:.
  Fly  2011 VQCAVLLLPDENREILYVLLEFLTIVAANSQQ------------NQMTSNNLGVCLAQSIFHSSI 2063

  Fly  1034 LTFS--------RDKEQENMIDAINVVRT---------MINHYEEIFNISAELL---NVIYTQ-- 1076
            .|.|        |..:...|.|...:...         ||.||::|:..:.|.|   |..|.:  
  Fly  2064 STGSASVSASPRRKGKGSGMPDMKELAEAKASHECLSFMIEHYKQIYTAAKEKLSKCNFSYMEES 2128

  Fly  1077 ---ALEACPE---------KLYELISTKV-YGTEWTQQQIDDPQPGSLSDVLLEPPIHGKRYENI 1128
               .|||..|         .|||..|..: .|.|.|:...   ...||:|..::     ..|:.:
  Fly  2129 KPLPLEALGEGMQFHNWRGYLYECTSATIKEGREKTRGWF---SINSLNDSSVD-----IAYKKV 2185

  Fly  1129 NDFNNINFKRCQDKRRDHSDPDKKKNNNENLEIITASLKISVAEQSHISLKEPIKEQEPITSYKQ 1193
            .|.:.:...||.   .:...|.|        |::...:|...:..:::...:.:|:.:..|...|
  Fly  2186 GDGHPLRLWRCS---TEIEGPPK--------EVLEFVIKQRASWDTNLLQCQTVKKLDDRTEIYQ 2239

  Fly  1194 FS 1195
            ::
  Fly  2240 YA 2241

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 65/215 (30%)
cv-cNP_001097786.1 SAM_DLC1,2-like 1382..1441 CDD:188937 16/101 (16%)
RhoGAP_DLC1 1893..2116 CDD:239840 66/234 (28%)
SRPBCC 2148..2343 CDD:301327 21/113 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.910

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