DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment RhoGAP102A and ARHGAP6

DIOPT Version :9

Sequence 1:NP_001245416.1 Gene:RhoGAP102A / 43781 FlyBaseID:FBgn0259216 Length:1256 Species:Drosophila melanogaster
Sequence 2:NP_038286.2 Gene:ARHGAP6 / 395 HGNCID:676 Length:974 Species:Homo sapiens


Alignment Length:577 Identity:180/577 - (31%)
Similarity:264/577 - (45%) Gaps:103/577 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   574 CTSAPTSPTSHSKLEKAIRTSSGLLSSSSQFISNILHGHNNAGNQFNTLTDKLPDCNQSHATASM 638
            |:|..|..|...|..          |.|..|...:..|.   |....::...||.     ..|..
Human   100 CSSFSTPSTPQEKSP----------SGSFHFDYEVPLGR---GGLKKSMAWDLPS-----VLAGP 146

  Fly   639 QKSKSLSNV---------GQFVAKRMWRSRSKSQ---NKRSYLKSSIPTLKWYPSEHFLWISESG 691
            ..|:|.|::         |.|.:.|.|..:.|.|   :.|.:     |.:.|.....|.|.|.||
Human   147 ASSRSASSILCSSGGGPNGIFASPRRWLQQRKFQSPPDSRGH-----PYVVWKSEGDFTWNSMSG 206

  Fly   692 ESFQIVETNLTRLSKIESDIVKNFALEKIQELNIGNIEDLKISPQKRRCVPK-----KKSLTTSF 751
            .|.::....:..||::|...::..|..::|       :|..:|.|  ..:||     ||||....
Human   207 RSVRLRSVPIQSLSELERARLQEVAFYQLQ-------QDCDLSCQ--ITIPKDGQKRKKSLRKKL 262

  Fly   752 FDNGKKDDQN----------PRSVLFGTSLECCLERDSKRNVTMEDRSKY--SLLSMFRGSGSTP 804
            ...||:.:::          |.|.:........|::|.:|: ..:|.|.:  |||..  |:....
Human   263 DSLGKEKNKDKEFIPQAFGMPLSQVIANDRAYKLKQDLQRD-EQKDASDFVASLLPF--GNKRQN 324

  Fly   805 GSVLKLNDNVRSCESLPSKSLEYGSTELS--AYVRGSFS---------NISKPLASL-------S 851
            ..:...|.::.|....|::|....:.|.:  |..||:.|         |.|:.|.:|       :
Human   325 KELSSSNSSLSSTSETPNESTSPNTPEPAPRARRRGAMSVDSITDLDDNQSRLLEALQLSLPAEA 389

  Fly   852 QSENE---DTELNFVKAYQEHSQLMVPIFVNNCIDYLEDNGLQQVGLFRVSTSKKRVKQLREEFD 913
            ||:.|   |.:|:....|::     ||..|::|..:||.:|||.||:|||.:|||||:|||||||
Human   390 QSKKEKARDKKLSLNPIYRQ-----VPRLVDSCCQHLEKHGLQTVGIFRVGSSKKRVRQLREEFD 449

  Fly   914 KDIYFGISVDTCPHDVATLLKEFLRDLPEPLLCNTLYLTFLKTQRIRNRRLQLEAISHLIRLLPI 978
            :.|...:..:...||||.||||||||:|:|||...||..|:.|..:.... ||..:..||.|||.
Human   450 RGIDVSLEEEHSVHDVAALLKEFLRDMPDPLLTRELYTAFINTLLLEPEE-QLGTLQLLIYLLPP 513

  Fly   979 PHRDTLYVLLVFLAKVAAHSDDIWSTEGCCLTLGNKMDSYNLATVFAPNILRSTHLTFSRDKE-- 1041
            .:.|||:.||.||:.||.|:||..|.:|..:| ||||.|.||||:|.||:|   |...|.|||  
Human   514 CNCDTLHRLLQFLSIVARHADDNISKDGQEVT-GNKMTSLNLATIFGPNLL---HKQKSSDKEFS 574

  Fly  1042 ------QENMIDAINVVRTMINHYEEIFNISAELLNVIYTQALEACPEKLYELISTK 1092
                  .|.....|.||:.||.:||.:|.:..:|.|.:....||..|:.:..|:..|
Human   575 VQSSARAEESTAIIAVVQKMIENYEALFMVPPDLQNEVLISLLETDPDVVDYLLRRK 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RhoGAP102ANP_001245416.1 RhoGAP 874..1069 CDD:295372 96/202 (48%)
ARHGAP6NP_038286.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..120 7/29 (24%)
PBP_N 67..>121 CDD:293698 7/30 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 322..361 7/38 (18%)
SH3-binding 342..352 1/9 (11%)
RhoGAP_ARHGAP6 402..608 CDD:239841 97/215 (45%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 639..672
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 709..729
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 742..838
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 860..945
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165146971
Domainoid 1 1.000 143 1.000 Domainoid score I4664
eggNOG 1 0.900 - - E1_KOG2710
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0006356
OrthoInspector 1 1.000 - - otm42089
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - LDO PTHR12635
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X6395
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
87.840

Return to query results.
Submit another query.